Methanococcus maripaludis S2 Module 43 Residual: 0.30

Residual: 0.30 Score: -18.2118 version: mmp_cmonkey_11_Oct_11
MMP0294 Bacterial quinoprotein (NCBI)

Details for MMP0294 - Bacterial quinoprotein (NCBI)

GO Terms: GO:0006118

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0294

Tuberculist Genomic Region

MMP1604 hypothetical protein (NCBI)

Details for MMP1604 - hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1604

Tuberculist Genomic Region

MMP0634 conserved hypothetical protein (NCBI)

Details for MMP0634 - conserved hypothetical protein (NCBI)

GO Terms: GO:0016020

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0634

Tuberculist Genomic Region

MMP1703 conserved hypothetical archaeal protein (NCBI)

Details for MMP1703 - conserved hypothetical archaeal protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1703

Tuberculist Genomic Region

MMP0710 cation-transporting ATPase (NCBI)

Details for MMP0710 - cation-transporting ATPase (NCBI)

GO Terms: GO:0006812, GO:0008152, GO:0016020, GO:0005524, GO:0015662

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0710

Tuberculist Genomic Region

MMP0172 hypothetical protein (NCBI)

Details for MMP0172 - hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0172

Tuberculist Genomic Region

MMP0711 magnesium, nickel and cobalt transport protein (NCBI)

Details for MMP0711 - magnesium, nickel and cobalt transport protein (NCBI)

GO Terms: GO:0006824, GO:0015693, GO:0016020, GO:0015087, GO:0015095

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0711

Tuberculist Genomic Region

MMP0718 hypothetical protein (NCBI)

Details for MMP0718 - hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0718

Tuberculist Genomic Region

MMP0763 hypothetical protein (NCBI)

Details for MMP0763 - hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0763

Tuberculist Genomic Region

MMP0719 predicted transcriptional regluator (NCBI)

Details for MMP0719 - predicted transcriptional regluator (NCBI)

GO Terms: GO:0006355, GO:0003677

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0719

Tuberculist Genomic Region

MMP0783 conserved hypothetical protein (NCBI)

Details for MMP0783 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0783

Tuberculist Genomic Region

MMP0762 TPR repeat (NCBI)

Details for MMP0762 - TPR repeat (NCBI)

GO Terms: GO:0005488

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0762

Tuberculist Genomic Region

MMP0784 conserved hypothetical protein (NCBI)

Details for MMP0784 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0784

Tuberculist Genomic Region

MMP1257 conserved hypothetical protein (NCBI)

Details for MMP1257 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1257

Tuberculist Genomic Region

MMP0964 hypothetical protein (NCBI)

Details for MMP0964 - hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0964

Tuberculist Genomic Region

MMP0102 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (NCBI)

Details for MMP0102 - Protein-L-isoaspartate(D-aspartate) O-methyltransferase (NCBI)

GO Terms: GO:0006464, GO:0004719

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0102

Tuberculist Genomic Region

MMP0996 hypothetical protein (NCBI)

Details for MMP0996 - hypothetical protein (NCBI)

GO Terms: GO:0009055

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0996

Tuberculist Genomic Region

MMP0305 oxidoreductase family member subunit beta (NCBI)

Details for MMP0305 - oxidoreductase family member subunit beta (NCBI)

GO Terms: GO:0047553, GO:0030976

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0305

Tuberculist Genomic Region

MMP0997 Blue (type 1) copper domain (NCBI)

Details for MMP0997 - Blue (type 1) copper domain (NCBI)

GO Terms: GO:0006118, GO:0005507, GO:0009055

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0997

Tuberculist Genomic Region

MMP0306 oxidoreductase family member subunit alpha (NCBI)

Details for MMP0306 - oxidoreductase family member subunit alpha (NCBI)

GO Terms: GO:0006118, GO:0047553

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0306

Tuberculist Genomic Region

MMP1291 Glycoside hydrolase, family 57 (NCBI)

Details for MMP1291 - Glycoside hydrolase, family 57 (NCBI)

GO Terms: GO:0005975, GO:0004556, GO:0016810

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1291

Tuberculist Genomic Region

MMP0614 related to iron-sulfur flavoprotein of Methanosarcina thermophila (NCBI)

Details for MMP0614 - related to iron-sulfur flavoprotein of Methanosarcina thermophila (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0614

Tuberculist Genomic Region

MMP1292 glucan 1,4-alpha-glucosidase (glucoamylase) (NCBI)

Details for MMP1292 - glucan 1,4-alpha-glucosidase (glucoamylase) (NCBI)

GO Terms: GO:0005976, GO:0004339

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1292

Tuberculist Genomic Region

MMP1294 Glycosyl transferase, group 1 (NCBI)

Details for MMP1294 - Glycosyl transferase, group 1 (NCBI)

GO Terms: GO:0009058, GO:0009011

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1294

Tuberculist Genomic Region

MMP1293 Glycosyl transferase, group 1 (NCBI)

Details for MMP1293 - Glycosyl transferase, group 1 (NCBI)

GO Terms: GO:0009058

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1293

Tuberculist Genomic Region

MMP0304 conserved hypothetical archaeal protein (NCBI)

Details for MMP0304 - conserved hypothetical archaeal protein (NCBI)

GO Terms: GO:0006281, GO:0003906

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0304

Tuberculist Genomic Region

MMP1295 glucose-6-phosphate isomerase (NCBI)

Details for MMP1295 - glucose-6-phosphate isomerase (NCBI)

GO Terms: GO:0006094, GO:0006096, GO:0004347

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1295

Tuberculist Genomic Region

Motif 1: e-value: 0.0000000018 e-value: 28
Regulator Interaction Influence Weight Other Influences

H2

down-regulates -0.57
Transcriptional regulator PadR-like family (NCBI)
putative transricptional regulator (NCBI)
up-regulates 0.25
Conserved Hypothetical protein with 2 CBS domains (NCBI)
Transcriptional regulator protein, Helix-turn-helix motif (NCBI)
up-regulates 0.12
Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0004553 hydrolase activity, hydrolyzing O-glycos... 3 0.03 2 0.0003
MF GO:0016798 hydrolase activity, acting on glycosyl b... 4 0.04 2 0.0006
MF GO:0016787 hydrolase activity 62 0.64 3 0.0206
MF GO:0046873 metal ion transmembrane transporter acti... 3 0.03 1 0.0308
MF GO:0016491 oxidoreductase activity 78 0.81 3 0.0382
MF GO:0003824 catalytic activity 298 3.08 6 0.0406
MF GO:0004520 endodeoxyribonuclease activity 4 0.04 1 0.0408
MF GO:0004536 deoxyribonuclease activity 4 0.04 1 0.0408
Log in to post comments