Methanococcus maripaludis S2 Module 44 Residual: 0.43

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Summary

Residual: 0.43 Score: -12.8419 version: mmp_cmonkey_11_Oct_11

Members

MMP0192 hypothetical protein (NCBI)

Details for MMP0192 - hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0192

Tuberculist Genomic Region

MMP0851 conserved hypothetical protein (NCBI)

Details for MMP0851 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0851

Tuberculist Genomic Region

MMP0275 Conserved hypothetical protein (NCBI)

Details for MMP0275 - Conserved hypothetical protein (NCBI)

GO Terms: GO:0006825, GO:0042597, GO:0005507

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0275

Tuberculist Genomic Region

MMP1193 hypothetical protein (NCBI)

Details for MMP1193 - hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1193

Tuberculist Genomic Region

MMP0343 conserved hypothetical protein (NCBI)

Details for MMP0343 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0343

Tuberculist Genomic Region

MMP1194 Collagen triple helix repeat:Surface protein from Gram-positive cocci, anchor region (NCBI)

Details for MMP1194 - Collagen triple helix repeat:Surface protein from Gram-positive cocci, anchor region (NCBI)

GO Terms: GO:0006817, GO:0005737

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1194

Tuberculist Genomic Region

MMP0466 hypothetical (NCBI)

Details for MMP0466 - hypothetical (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0466

Tuberculist Genomic Region

MMP1481 Cobalamin biosynthesis protein (NCBI)

Details for MMP1481 - Cobalamin biosynthesis protein (NCBI)

GO Terms: GO:0009236, GO:0016021

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1481

Tuberculist Genomic Region

MMP0467 hypothetical protein (NCBI)

Details for MMP0467 - hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0467

Tuberculist Genomic Region

MMP1482 conserved hypothetical protein (NCBI)

Details for MMP1482 - conserved hypothetical protein (NCBI)

GO Terms: GO:0006824, GO:0009236, GO:0016020, GO:0015087

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1482

Tuberculist Genomic Region

MMP0468 hypothetical protein (NCBI)

Details for MMP0468 - hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0468

Tuberculist Genomic Region

MMP1483 Cobalt transport protein Q (NCBI)

Details for MMP1483 - Cobalt transport protein Q (NCBI)

GO Terms: GO:0006824, GO:0009236, GO:0015087

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1483

Tuberculist Genomic Region

MMP0469 hypothetical protein (NCBI)

Details for MMP0469 - hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0469

Tuberculist Genomic Region

MMP1602 hypothetical protein (NCBI)

Details for MMP1602 - hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1602

Tuberculist Genomic Region

MMP0470 MCM family related protein (NCBI)

Details for MMP0470 - MCM family related protein (NCBI)

GO Terms: GO:0006270, GO:0005524, GO:0008094, GO:0003677

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0470

Tuberculist Genomic Region

MMP0057 FO synthase, subunit CofH (NCBI)

Details for MMP0057 - FO synthase, subunit CofH (NCBI)

GO Terms: GO:0008152, GO:0003824, GO:0051536

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0057

Tuberculist Genomic Region

MMP0471 conserved hypothetical protein (NCBI)

Details for MMP0471 - conserved hypothetical protein (NCBI)

GO Terms: GO:0045449

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0471

Tuberculist Genomic Region

MMP0138 formate dehydrogenase alpha subunit (NCBI)

Details for MMP0138 - formate dehydrogenase alpha subunit (NCBI)

GO Terms: GO:0006118, GO:0015942, GO:0009326, GO:0030151, GO:0008863

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0138

Tuberculist Genomic Region

MMP0472 Probable integrase/recombinase (NCBI)

Details for MMP0472 - Probable integrase/recombinase (NCBI)

GO Terms: GO:0006310, GO:0015074, GO:0003677

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0472

Tuberculist Genomic Region

MMP0490 conserved hypothetical protein (NCBI)

Details for MMP0490 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0490

Tuberculist Genomic Region

MMP0502 hypothetical protein (NCBI)

Details for MMP0502 - hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0502

Tuberculist Genomic Region

MMP0491 MotA/TolQ/ExbB proton channel (NCBI)

Details for MMP0491 - MotA/TolQ/ExbB proton channel (NCBI)

GO Terms: GO:0006810, GO:0016020, GO:0008565

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0491

Tuberculist Genomic Region

MMP0680 Uracil Phosphoribosyltransferase (NCBI)

Details for MMP0680 - Uracil Phosphoribosyltransferase (NCBI)

GO Terms: GO:0009116, GO:0006223, GO:0004845

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0680

Tuberculist Genomic Region

MMP0492 conserved hypothetical protein (NCBI)

Details for MMP0492 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0492

Tuberculist Genomic Region

MMP0735 N-6 Adenine-specific DNA methylase:N6 adenine-specific DNA methyltransferase, D12 class (NCBI)

Details for MMP0735 - N-6 Adenine-specific DNA methylase:N6 adenine-specific DNA methyltransferase, D12 class (NCBI)

GO Terms: GO:0006306, GO:0003677, GO:0009007, GO:0003676

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0735

Tuberculist Genomic Region

MMP0493 cobaltochelatase (RefSeq)

Details for MMP0493 - cobaltochelatase (RefSeq)

GO Terms: GO:0009058, GO:0051116

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0493

Tuberculist Genomic Region

Displaying 1 - 26 of 26

Motifs

Motif 1: e-value: 0.0072 e-value: 18

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences

MMP0209

Conserved hypothetical protein (NCBI)

Formate

 down-regulates -0.45

MMP0209

Formate

MMP0052

Conserved Hypothetical protein with 2 CBS domains (NCBI)

MMP1137

Lrp-Like Transcriptional regulatory proteins, AsnC family (NCBI)
 up-regulates 0.23

MMP0052

MMP1137

MMP0907

predicted archaeal transcriptional regulator (NCBI)
 up-regulates 0.15

MMP0907

MMP1100

putative transricptional regulator (NCBI)

MMP1210

 up-regulates 0.14

MMP1100

MMP1210

GO Enrichment

Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0005488 binding 431 3.35 6 0.0300
MF GO:0051539 4 iron, 4 sulfur cluster binding 37 0.29 2 0.0300
Category: CC
Category GO ID GO Term Annotated Expected Significant p-value
CC GO:0043190 ATP-binding cassette (ABC) transporter c... 3 0.05 2 0.0006
CC GO:0043234 protein complex 5 0.08 2 0.0018
CC GO:0005886 plasma membrane 4 0.07 2 0.0011
CC GO:1902494 catalytic complex 3 0.05 2 0.0006
CC GO:0044459 plasma membrane part 3 0.05 2 0.0006
CC GO:0098533 ATPase dependent transmembrane transport... 3 0.05 2 0.0006
CC GO:1902495 transmembrane transporter complex 3 0.05 2 0.0006
CC GO:1990351 transporter complex 3 0.05 2 0.0006
CC GO:0071944 cell periphery 8 0.13 2 0.0050

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