Methanococcus maripaludis S2 Module 85 Residual: 0.38

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Summary

Residual: 0.38 Score: -11.4995 version: mmp_cmonkey_11_Oct_11

Members

MMP0018 Transcriptional regulator, LysR Family Member (NCBI)

Details for MMP0018 - Transcriptional regulator, LysR Family Member (NCBI)

GO Terms: GO:0006355, GO:0005622, GO:0003700, GO:0043565

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0018

Tuberculist Genomic Region

MMP1268 conserved hypothetical protein (NCBI)

Details for MMP1268 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1268

Tuberculist Genomic Region

MMP0161 2-phosphosulfolactate phosphatase (NCBI)

Details for MMP0161 - 2-phosphosulfolactate phosphatase (NCBI)

GO Terms: GO:0019295, GO:0000287, GO:0050532

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0161

Tuberculist Genomic Region

MMP1423 putative glycosyl transferase, family 4:Aldehyde dehydrogenase (NCBI)

Details for MMP1423 - putative glycosyl transferase, family 4:Aldehyde dehydrogenase (NCBI)

GO Terms: GO:0016021, GO:0008963

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1423

Tuberculist Genomic Region

MMP0424 hypothetical (NCBI)

Details for MMP0424 - hypothetical (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0424

Tuberculist Genomic Region

MMP1501 Protein of unknown function UPF0025:Metallo-phosphoesterase:Serine/threonine-specific protein phosphatase (NCBI)

Details for MMP1501 - Protein of unknown function UPF0025:Metallo-phosphoesterase:Serine/threonine-specific protein phosphatase (NCBI)

GO Terms: GO:0016787

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1501

Tuberculist Genomic Region

MMP0454 conserved hypothetical archaeal protein (NCBI)

Details for MMP0454 - conserved hypothetical archaeal protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0454

Tuberculist Genomic Region

MMP0140 conserved hypothetical protein (NCBI)

Details for MMP0140 - conserved hypothetical protein (NCBI)

GO Terms: GO:0003998, GO:0008270, GO:0030528

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0140

Tuberculist Genomic Region

MMP0459 putative (NC_001811) unknown [Methanococcus maripaludis] gb|AAC45262.1| (U47023) unknown [Methanococcus maripaludis] (NCBI)

Details for MMP0459 - putative (NC_001811) unknown [Methanococcus maripaludis] gb|AAC45262.1| (U47023) unknown [Methanococcus maripaludis] (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0459

Tuberculist Genomic Region

MMP0211 conserved hypothetical protein (NCBI)

Details for MMP0211 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0211

Tuberculist Genomic Region

MMP0512 molybdenum containing formylmethanofuran dehydrogenase, subunit B (NCBI)

Details for MMP0512 - molybdenum containing formylmethanofuran dehydrogenase, subunit B (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0512

Tuberculist Genomic Region

MMP0478 conserved hypothetical protein (NCBI)

Details for MMP0478 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0478

Tuberculist Genomic Region

MMP0522 conserved hypothetical protein (NCBI)

Details for MMP0522 - conserved hypothetical protein (NCBI)

GO Terms: GO:0030246

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0522

Tuberculist Genomic Region

MMP0517 conserved hypothetical protein (NCBI)

Details for MMP0517 - conserved hypothetical protein (NCBI)

GO Terms: GO:0016787

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0517

Tuberculist Genomic Region

MMP0523 ABC transporter ATP-binding protein (NCBI)

Details for MMP0523 - ABC transporter ATP-binding protein (NCBI)

GO Terms: GO:0005524, GO:0016887

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0523

Tuberculist Genomic Region

MMP0565 conserved hypothetical archaeal protein (NCBI)

Details for MMP0565 - conserved hypothetical archaeal protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0565

Tuberculist Genomic Region

MMP0538 hypothetical protein (NCBI)

Details for MMP0538 - hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0538

Tuberculist Genomic Region

MMP0789 Permease for cytosine/purines, uracil, thiamine, allantoin (NCBI)

Details for MMP0789 - Permease for cytosine/purines, uracil, thiamine, allantoin (NCBI)

GO Terms: GO:0015931, GO:0016020, GO:0015205

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0789

Tuberculist Genomic Region

MMP0731 Exonuclease VII, small subunit related protein (NCBI)

Details for MMP0731 - Exonuclease VII, small subunit related protein (NCBI)

GO Terms: GO:0006308, GO:0009318, GO:0008855

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0731

Tuberculist Genomic Region

MMP0892 acetyltransferase related protein (NCBI)

Details for MMP0892 - acetyltransferase related protein (NCBI)

GO Terms: GO:0008152, GO:0008080

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0892

Tuberculist Genomic Region

MMP0794 hypothetical protein (NCBI)

Details for MMP0794 - hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0794

Tuberculist Genomic Region

MMP1125 conserved hypothetical protein (NCBI)

Details for MMP1125 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1125

Tuberculist Genomic Region

MMP0807 Carboxymuconolactone decarboxylase Related Protein (NCBI)

Details for MMP0807 - Carboxymuconolactone decarboxylase Related Protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0807

Tuberculist Genomic Region

MMP1173 conserved membrane protein (NCBI)

Details for MMP1173 - conserved membrane protein (NCBI)

GO Terms: GO:0030001, GO:0016020, GO:0046873

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1173

Tuberculist Genomic Region

MMP0828 hypothetical protein (NCBI)

Details for MMP0828 - hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0828

Tuberculist Genomic Region

MMP1180 conserved hypothetical protein (NCBI)

Details for MMP1180 - conserved hypothetical protein (NCBI)

GO Terms: GO:0006827, GO:0005381, GO:0003824, GO:0051536

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1180

Tuberculist Genomic Region

MMP0835 conserved hypothetical protein (NCBI)

Details for MMP0835 - conserved hypothetical protein (NCBI)

GO Terms: GO:0006810, GO:0016021, GO:0005215

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0835

Tuberculist Genomic Region

MMP1535 Conserved hypothetical archaeal protein (NCBI)

Details for MMP1535 - Conserved hypothetical archaeal protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1535

Tuberculist Genomic Region

MMP1179 SAM (and some other nucleotide) binding motif:Generic methyltransferase (NCBI)

Details for MMP1179 - SAM (and some other nucleotide) binding motif:Generic methyltransferase (NCBI)

GO Terms: GO:0008610, GO:0008152, GO:0006479, GO:0005737, GO:0008825, GO:0008168, GO:0008276

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1179

Tuberculist Genomic Region

Displaying 1 - 29 of 29

Motifs

Motif 1: e-value: 1000 e-value: 12000

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences
[field_regulator_taxonomy_regulat_1]

GO Enrichment

Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0016209 antioxidant activity 3 0.04 1 0.0420
MF GO:0016684 oxidoreductase activity, acting on perox... 3 0.04 1 0.0420
MF GO:0016791 phosphatase activity 3 0.04 1 0.0420
MF GO:0042578 phosphoric ester hydrolase activity 3 0.04 1 0.0420
Category: BP
Category GO ID GO Term Annotated Expected Significant p-value
BP GO:0019439 aromatic compound catabolic process 6 0.03 1 0.0310
BP GO:0044248 cellular catabolic process 9 0.05 1 0.0470
BP GO:0044265 cellular macromolecule catabolic process 3 0.02 1 0.0160
BP GO:0044270 cellular nitrogen compound catabolic pro... 3 0.02 1 0.0160
BP GO:0006259 DNA metabolic process 5 0.03 1 0.0260
BP GO:0046700 heterocycle catabolic process 3 0.02 1 0.0160
BP GO:0009057 macromolecule catabolic process 3 0.02 1 0.0160
BP GO:0034655 nucleobase-containing compound catabolic... 3 0.02 1 0.0160
BP GO:1901361 organic cyclic compound catabolic proces... 6 0.03 1 0.0310

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