Methanococcus maripaludis S2 Module 122 Residual: 0.23

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Summary

Residual: 0.23 Score: -20.4333 version: mmp_cmonkey_11_Oct_11

Members

MMP0131 Pyridoxal phosphate-dependent amino acid decarboxylase (NCBI)

Details for MMP0131 - Pyridoxal phosphate-dependent amino acid decarboxylase (NCBI)

GO Terms: GO:0009058, GO:0019752, GO:0030170, GO:0016769, GO:0016831

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0131

Tuberculist Genomic Region

MMP1133 L-sulfolactate dehydrogenase/(S)-hydroxyglutaric acid dehydrogenase (NCBI)

Details for MMP1133 - L-sulfolactate dehydrogenase/(S)-hydroxyglutaric acid dehydrogenase (NCBI)

GO Terms: GO:0008152, GO:0016491

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1133

Tuberculist Genomic Region

MMP0185 5'-methylthioadenosine phosphorylase (NCBI)

Details for MMP0185 - 5'-methylthioadenosine phosphorylase (NCBI)

GO Terms: GO:0009116, GO:0017061

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0185

Tuberculist Genomic Region

MMP1491 Chlorohydrolase (NCBI)

Details for MMP1491 - Chlorohydrolase (NCBI)

GO Terms: GO:0016810

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1491

Tuberculist Genomic Region

MMP0222 conserved hypothetical archaeal protein (NCBI)

Details for MMP0222 - conserved hypothetical archaeal protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0222

Tuberculist Genomic Region

MMP1521 conserved hypothetical archaeal protein (NCBI)

Details for MMP1521 - conserved hypothetical archaeal protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1521

Tuberculist Genomic Region

MMP0329 conserved archaeal hypothetical protein (NCBI)

Details for MMP0329 - conserved archaeal hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0329

Tuberculist Genomic Region

MMP0291 hydrogenase expression/formation protein related (NCBI)

Details for MMP0291 - hydrogenase expression/formation protein related (NCBI)

GO Terms: GO:0003824

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0291

Tuberculist Genomic Region

MMP0330 Precorrin-8X methylmutase CbiC/CobH (NCBI)

Details for MMP0330 - Precorrin-8X methylmutase CbiC/CobH (NCBI)

GO Terms: GO:0009236, GO:0016993

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0330

Tuberculist Genomic Region

MMP0910 hypothetical protein (NCBI)

Details for MMP0910 - hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0910

Tuberculist Genomic Region

MMP1086 conserved hypothetical protein (NCBI)

Details for MMP1086 - conserved hypothetical protein (NCBI)

GO Terms: GO:0008152, GO:0003824, GO:0051536

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1086

Tuberculist Genomic Region

MMP0938 cobalamin (5'-phosphate) synthase (NCBI)

Details for MMP0938 - cobalamin (5'-phosphate) synthase (NCBI)

GO Terms: GO:0009236, GO:0051073, GO:0008818

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0938

Tuberculist Genomic Region

MMP1132 tRNA-intron endonuclease (NCBI)

Details for MMP1132 - tRNA-intron endonuclease (NCBI)

GO Terms: GO:0006388, GO:0000214, GO:0003677, GO:0000213

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1132

Tuberculist Genomic Region

MMP1659 Aspartate carbamoyltransferase; catalytic subunit (NCBI)

Details for MMP1659 - Aspartate carbamoyltransferase; catalytic subunit (NCBI)

GO Terms: GO:0006207, GO:0006520, GO:0016597, GO:0004070

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1659

Tuberculist Genomic Region

Displaying 1 - 14 of 14

Motifs

Motif 1: e-value: 7.5 e-value: 710

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences

MMP0033

LysR family member (NCBI)
 up-regulates 0.27

MMP0033

MMP1052

conserved hypothetical archaeal protein (NCBI)

MMP1499

conserved hypothetical archaeal protein (NCBI)
 up-regulates 0.23

MMP1052

MMP1499

MMP0168

Transcriptional regulator PadR-like family (NCBI)

MMP0907

predicted archaeal transcriptional regulator (NCBI)
 up-regulates 0.19

MMP0168

MMP0907

MMP0033

LysR family member (NCBI)

MMP0386

archaeal histone A (NCBI)
 up-regulates 0.13

MMP0033

MMP0386

GO Enrichment

Category: BP
Category GO ID GO Term Annotated Expected Significant p-value
BP GO:0072527 pyrimidine-containing compound metabolic... 13 0.27 2 0.0240
BP GO:0072528 pyrimidine-containing compound biosynthe... 13 0.27 2 0.0240
BP GO:0006766 vitamin metabolic process 18 0.38 2 0.0450
BP GO:0006767 water-soluble vitamin metabolic process 18 0.38 2 0.0450
BP GO:0009110 vitamin biosynthetic process 18 0.38 2 0.0450
BP GO:0042364 water-soluble vitamin biosynthetic proce... 18 0.38 2 0.0450
Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0003824 catalytic activity 298 2.31 6 0.0032
MF GO:0016757 transferase activity, transferring glyco... 4 0.03 1 0.0307

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