Methanococcus maripaludis S2 Module 129 Residual: 0.32

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Summary

Residual: 0.32 Score: -14.9756 version: mmp_cmonkey_11_Oct_11

Members

MMP0264 Mechanosensitive (MS) ion channel (NCBI)

Details for MMP0264 - Mechanosensitive (MS) ion channel (NCBI)

GO Terms: GO:0016020

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0264

Tuberculist Genomic Region

MMP0580 Radical-activating enzyme (NCBI)

Details for MMP0580 - Radical-activating enzyme (NCBI)

GO Terms: GO:0008152, GO:0043365, GO:0051536

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0580

Tuberculist Genomic Region

MMP0554 SAM (and some other nucleotide) binding motif (NCBI)

Details for MMP0554 - SAM (and some other nucleotide) binding motif (NCBI)

GO Terms: GO:0008168

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0554

Tuberculist Genomic Region

MMP0876 FO synthase, subunit CofG (NCBI)

Details for MMP0876 - FO synthase, subunit CofG (NCBI)

GO Terms: GO:0008152, GO:0003824, GO:0051536

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0876

Tuberculist Genomic Region

MMP0906 conserved hypothetical protein (NCBI)

Details for MMP0906 - conserved hypothetical protein (NCBI)

GO Terms: GO:0042779, GO:0042781

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0906

Tuberculist Genomic Region

MMP0883 hypothetical protein (NCBI)

Details for MMP0883 - hypothetical protein (NCBI)

GO Terms: GO:0005488

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0883

Tuberculist Genomic Region

MMP0941 phosphoadenosine phosphosulfate sulfotransferase; putative (NCBI)

Details for MMP0941 - phosphoadenosine phosphosulfate sulfotransferase; putative (NCBI)

GO Terms: GO:0008152, GO:0004604, GO:0016740, GO:0003723

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0941

Tuberculist Genomic Region

MMP0970 ATP-dependent DNA ligase (NCBI)

Details for MMP0970 - ATP-dependent DNA ligase (NCBI)

GO Terms: GO:0006281, GO:0006260, GO:0006310, GO:0005524, GO:0003677, GO:0003910

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0970

Tuberculist Genomic Region

MMP1121 metal-dependent phophohydrolase related protein (NCBI)

Details for MMP1121 - metal-dependent phophohydrolase related protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1121

Tuberculist Genomic Region

MMP1011 Glutamyl-tRNA synthetase (NCBI)

Details for MMP1011 - Glutamyl-tRNA synthetase (NCBI)

GO Terms: GO:0006424, GO:0009332, GO:0005524, GO:0004818

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1011

Tuberculist Genomic Region

MMP1440 conserved hypothetical protein (NCBI)

Details for MMP1440 - conserved hypothetical protein (NCBI)

GO Terms: GO:0008152, GO:0003824, GO:0051536

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1440

Tuberculist Genomic Region

MMP1109 conserved hypothetical protein (NCBI)

Details for MMP1109 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1109

Tuberculist Genomic Region

MMP1467 conserved hypothetical protein (NCBI)

Details for MMP1467 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1467

Tuberculist Genomic Region

MMP1265 Glutamyl-tRNA(Gln) amidotransferase subunit E (NCBI)

Details for MMP1265 - Glutamyl-tRNA(Gln) amidotransferase subunit E (NCBI)

GO Terms: GO:0006412, GO:0005737, GO:0050567, GO:0004812, GO:0005524

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1265

Tuberculist Genomic Region

MMP1630 ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase (NCBI)

Details for MMP1630 - ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase (NCBI)

GO Terms: GO:0005524, GO:0016887

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1630

Tuberculist Genomic Region

MMP1334 Solute-binding protein/glutamate receptor:ATP/GTP-binding site motif A (P-loop):GTP-binding protein, HSR1-related:GTP-binding... (NCBI)

Details for MMP1334 - Solute-binding protein/glutamate receptor:ATP/GTP-binding site motif A (P-loop):GTP-binding protein, HSR1-related:GTP-binding... (NCBI)

GO Terms: GO:0015684, GO:0005622, GO:0016021, GO:0009276, GO:0005525, GO:0003924, GO:0015093

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1334

Tuberculist Genomic Region

MMP0036 Transcription factor E (NCBI)

Details for MMP0036 - Transcription factor E (NCBI)

GO Terms: GO:0006367, GO:0005673, GO:0003702

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0036

Tuberculist Genomic Region

MMP1600 Ribosomal protein S6 modification enzyme (glutaminyl transferase) related (NCBI)

Details for MMP1600 - Ribosomal protein S6 modification enzyme (glutaminyl transferase) related (NCBI)

GO Terms: GO:0006464, GO:0005524, GO:0003824

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1600

Tuberculist Genomic Region

MMP0072 conserved archaeal protein (NCBI)

Details for MMP0072 - conserved archaeal protein (NCBI)

GO Terms: GO:0005783, GO:0016787

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0072

Tuberculist Genomic Region

MMP1112 conserved hypothetical archaeal protein (NCBI)

Details for MMP1112 - conserved hypothetical archaeal protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1112

Tuberculist Genomic Region

MMP0265 conserved hypothetical protein (NCBI)

Details for MMP0265 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0265

Tuberculist Genomic Region

MMP1356 conserved hypothetical protein (NCBI)

Details for MMP1356 - conserved hypothetical protein (NCBI)

GO Terms: GO:0009435, GO:0005737, GO:0003952, GO:0004808

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1356

Tuberculist Genomic Region

MMP0296 conserved hypothetical archaeal protein (NCBI)

Details for MMP0296 - conserved hypothetical archaeal protein (NCBI)

GO Terms: GO:0006886, GO:0006888, GO:0030127, GO:0005515, GO:0003676, GO:0008270

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0296

Tuberculist Genomic Region

MMP0131 Pyridoxal phosphate-dependent amino acid decarboxylase (NCBI)

Details for MMP0131 - Pyridoxal phosphate-dependent amino acid decarboxylase (NCBI)

GO Terms: GO:0009058, GO:0019752, GO:0030170, GO:0016769, GO:0016831

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0131

Tuberculist Genomic Region

Displaying 1 - 24 of 24

Motifs

Motif 1: e-value: 2100 e-value: 24000

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences

MMP0168

Transcriptional regulator PadR-like family (NCBI)

MMP0907

predicted archaeal transcriptional regulator (NCBI)
 up-regulates 0.23

MMP0168

MMP0907

MMP1376

conserved hypothetical protein (NCBI)

H2

 down-regulates -0.18

MMP1376

H2

MMP1023

Transcriptional regulator, TetR Family Member (NCBI)

MMP1303

Sensory transduction histidine kinase (NCBI)
 up-regulates 0.16

MMP1023

MMP1303

MMP1303

Sensory transduction histidine kinase (NCBI)

H2

 up-regulates 0.15

MMP1303

H2

MMP0787

Transcriptional regulator, MarR Family Member (NCBI)

MMP0907

predicted archaeal transcriptional regulator (NCBI)
 up-regulates 0.13

MMP0787

MMP0907

GO Enrichment

Category:
Annotated

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