Methanococcus maripaludis S2 Module 157 Residual: 0.26

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Summary

Residual: 0.26 Score: -18.3711 version: mmp_cmonkey_11_Oct_11

Members

MMP0131 Pyridoxal phosphate-dependent amino acid decarboxylase (NCBI)

Details for MMP0131 - Pyridoxal phosphate-dependent amino acid decarboxylase (NCBI)

GO Terms: GO:0009058, GO:0019752, GO:0030170, GO:0016769, GO:0016831

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0131

Tuberculist Genomic Region

MMP0706 NAD binding site:UDP-glucose/GDP-mannose dehydrogenase (NCBI)

Details for MMP0706 - NAD binding site:UDP-glucose/GDP-mannose dehydrogenase (NCBI)

GO Terms: GO:0006118, GO:0016616, GO:0051287

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0706

Tuberculist Genomic Region

MMP0185 5'-methylthioadenosine phosphorylase (NCBI)

Details for MMP0185 - 5'-methylthioadenosine phosphorylase (NCBI)

GO Terms: GO:0009116, GO:0017061

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0185

Tuberculist Genomic Region

MMP1024 MCM family related protein (NCBI)

Details for MMP1024 - MCM family related protein (NCBI)

GO Terms: GO:0006270, GO:0005524, GO:0008094, GO:0003677

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1024

Tuberculist Genomic Region

MMP0222 conserved hypothetical archaeal protein (NCBI)

Details for MMP0222 - conserved hypothetical archaeal protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0222

Tuberculist Genomic Region

MMP1121 metal-dependent phophohydrolase related protein (NCBI)

Details for MMP1121 - metal-dependent phophohydrolase related protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1121

Tuberculist Genomic Region

MMP0328 Conserved hypothetical protein (NCBI)

Details for MMP0328 - Conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0328

Tuberculist Genomic Region

MMP1132 tRNA-intron endonuclease (NCBI)

Details for MMP1132 - tRNA-intron endonuclease (NCBI)

GO Terms: GO:0006388, GO:0000214, GO:0003677, GO:0000213

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1132

Tuberculist Genomic Region

MMP0329 conserved archaeal hypothetical protein (NCBI)

Details for MMP0329 - conserved archaeal hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0329

Tuberculist Genomic Region

MMP1133 L-sulfolactate dehydrogenase/(S)-hydroxyglutaric acid dehydrogenase (NCBI)

Details for MMP1133 - L-sulfolactate dehydrogenase/(S)-hydroxyglutaric acid dehydrogenase (NCBI)

GO Terms: GO:0008152, GO:0016491

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1133

Tuberculist Genomic Region

MMP0330 Precorrin-8X methylmutase CbiC/CobH (NCBI)

Details for MMP0330 - Precorrin-8X methylmutase CbiC/CobH (NCBI)

GO Terms: GO:0009236, GO:0016993

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0330

Tuberculist Genomic Region

MMP1264 conserved hypothetical protein (NCBI)

Details for MMP1264 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1264

Tuberculist Genomic Region

MMP0357 UDP-N-acetylglucosamine 2-epimerase (NCBI)

Details for MMP0357 - UDP-N-acetylglucosamine 2-epimerase (NCBI)

GO Terms: GO:0006047, GO:0009103, GO:0008761

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0357

Tuberculist Genomic Region

MMP1344 hypothetical protein (NCBI)

Details for MMP1344 - hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1344

Tuberculist Genomic Region

MMP0358 conserved hypothetical archaeal protein (NCBI)

Details for MMP0358 - conserved hypothetical archaeal protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0358

Tuberculist Genomic Region

MMP1500 Cell division protein FtsZ2 (NCBI)

Details for MMP1500 - Cell division protein FtsZ2 (NCBI)

GO Terms: GO:0051258, GO:0007017, GO:0005737, GO:0043234, GO:0005874, GO:0005525, GO:0003924

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1500

Tuberculist Genomic Region

MMP0390 conserved hypothetical protein (NCBI)

Details for MMP0390 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0390

Tuberculist Genomic Region

MMP1521 conserved hypothetical archaeal protein (NCBI)

Details for MMP1521 - conserved hypothetical archaeal protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1521

Tuberculist Genomic Region

Displaying 1 - 18 of 18

Motifs

Motif 1: e-value: 210 e-value: 2400

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences

MMP0168

Transcriptional regulator PadR-like family (NCBI)

MMP0907

predicted archaeal transcriptional regulator (NCBI)
 up-regulates 0.28

MMP0168

MMP0907

MMP0386

archaeal histone A (NCBI)

MMP0402

Conserved hypothetical Archael protein (NCBI)
 up-regulates 0.28

MMP0386

MMP0402

MMP0033

LysR family member (NCBI)
 up-regulates 0.24

MMP0033

MMP0033

LysR family member (NCBI)

MMP0386

archaeal histone A (NCBI)
 down-regulates -0.21

MMP0033

MMP0386

MMP0168

Transcriptional regulator PadR-like family (NCBI)

MMP1499

conserved hypothetical archaeal protein (NCBI)
 up-regulates 0.15

MMP0168

MMP1499

MMP0787

Transcriptional regulator, MarR Family Member (NCBI)

MMP1499

conserved hypothetical archaeal protein (NCBI)
 up-regulates 0.13

MMP0787

MMP1499

MMP0607

Transcriptional repressor of nif and glnA operons (NCBI)
 up-regulates 0.12

MMP0607

GO Enrichment

Category: BP
Category GO ID GO Term Annotated Expected Significant p-value
BP GO:0000910 cytokinesis 3 0.05 1 0.0460
BP GO:0007049 cell cycle 3 0.05 1 0.0460
BP GO:0022402 cell cycle process 3 0.05 1 0.0460
BP GO:0051301 cell division 3 0.05 1 0.0460
Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0016857 racemase and epimerase activity, acting ... 3 0.03 1 0.0310
MF GO:0016757 transferase activity, transferring glyco... 4 0.04 1 0.0410
MF GO:0016854 racemase and epimerase activity 4 0.04 1 0.0410

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