Cre10.g466700.t1.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre10.g466700.t1.1 chromosome_10 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein CDS 6513583 6517112 - 3 529

Phytozome

Locus Genomic View Functional Annotation
Cre10.g466700.t1.1 Cre10.g466700.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g11438.t1 JGI187819 30790846 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0060
motif_0060_1

motif_0060_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0059
Motif Bicluster: 
bicluster_0060
Width: 
24
Number of Sites: 
1
Consensus: 
atcAcgtnAtantATATaTAttat
motif_0060_2

motif_0060_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
29
Motif Bicluster: 
bicluster_0060
Width: 
21
Number of Sites: 
1
Consensus: 
TAGTTgGGGCTGGTaTTTcCA
 0.16
bicluster_0089
motif_0089_1

motif_0089_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00000000000014
Motif Bicluster: 
bicluster_0089
Width: 
24
Number of Sites: 
1
Consensus: 
GTGngTGgGTGgGTGgGTGgGTgg
motif_0089_2

motif_0089_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.013
Motif Bicluster: 
bicluster_0089
Width: 
24
Number of Sites: 
1
Consensus: 
CTgCtGCTgCTGCtgctGCtGCtg
 0.25

GO Terms

GO:0016491 GO:0016706 GO:0055114 -

oxidoreductase activity

GO Category: 
molecular_function
Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: A + 2-oxoglutarate + O2 = B + succinate + CO2. This is an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from 2-oxoglutarate and one other donor, and one atom of oxygen is incorporated into each donor.

oxidation-reduction process

GO Category: 
biological_process
Details: 
A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI187819

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