Cre01.g053000.t1.2 NAD-dependent glycerol-3-phosphate dehydrogenase family protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre01.g053000.t1.2 chromosome_1 NAD-dependent glycerol-3-phosphate dehydrogenase family protein CDS 7373686 7379583 + 5 897

Phytozome

Locus Genomic View Functional Annotation
Cre01.g053000.t1.2 Cre01.g053000.t1.2

Help

Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
GPD1 g1171.t1, Cre01.g053000.t1.1 JGI146945 30788743 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0006
motif_0006_1

motif_0006_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0000000074
Motif Bicluster: 
bicluster_0006
Width: 
21
Number of Sites: 
1
Consensus: 
aGGCGGcGGcgGcgGCGGcgg
motif_0006_2

motif_0006_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
95
Motif Bicluster: 
bicluster_0006
Width: 
8
Number of Sites: 
1
Consensus: 
AAaaTGTT
 0.19
bicluster_0166
motif_0166_1

motif_0166_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000000025
Motif Bicluster: 
bicluster_0166
Width: 
11
Number of Sites: 
1
Consensus: 
TGtGTGCaTGt
motif_0166_2

motif_0166_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.58
Motif Bicluster: 
bicluster_0166
Width: 
23
Number of Sites: 
1
Consensus: 
tttAntTTGgcCTGgTATtTaCA
 0.32

GO Terms

GO:0016616 GO:0051287 GO:0046168 GO:0055114 GO:0005737 GO:0004367 GO:0005975 -

oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor

GO Category: 
molecular_function
Details: 
Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP.

NAD binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD+, or the reduced form, NADH.

glycerol-3-phosphate catabolic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways resulting in the breakdown of glycerol-3-phosphate, a phosphoric monoester of glycerol.

oxidation-reduction process

GO Category: 
biological_process
Details: 
A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

cytoplasm

GO Category: 
cellular_component
Details: 
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

glycerol-3-phosphate dehydrogenase [NAD+] activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: sn-glycerol 3-phosphate + NAD+ = glycerone phosphate + NADH + H+.

carbohydrate metabolic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI146945

Add comment

Log in to post comments