Cre09.g404750.t1.1 Scavenger receptor cysteine rich (SRCR) protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre09.g404750.t1.1 chromosome_9 Scavenger receptor cysteine rich (SRCR) protein CDS 406341 412599 - 6 258

Phytozome

Locus Genomic View Functional Annotation
Cre09.g404750.t1.1 Cre09.g404750.t1.1

Help

Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
SRR2 g9162.t1 Not available 30780640 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0081
motif_0081_1

motif_0081_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0012
Motif Bicluster: 
bicluster_0081
Width: 
15
Number of Sites: 
1
Consensus: 
CTGCcGcTgCgACTG
motif_0081_2

motif_0081_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
21
Motif Bicluster: 
bicluster_0081
Width: 
24
Number of Sites: 
1
Consensus: 
cATAGGCAatAAaAggcATtgAag
 0.12
bicluster_0210
motif_0210_1

motif_0210_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:17
e.value: 
20
Motif Bicluster: 
bicluster_0210
Width: 
11
Number of Sites: 
1
Consensus: 
ATGcATGaAgA
motif_0210_2

motif_0210_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:17
e.value: 
0.15
Motif Bicluster: 
bicluster_0210
Width: 
21
Number of Sites: 
1
Consensus: 
GGCaGgAGcgGcAGtgGtaGC
 0.12

GO Terms

GO:0005044 GO:0016020 -

scavenger receptor activity

GO Category: 
molecular_function
Details: 
Combining with any modified low-density lipoprotein (LDL) or other polyanionic ligand and delivering the ligand into the cell via endocytosis. Ligands include acetylated and oxidized LDL, Gram-positive and Gram-negative bacteria, apoptotic cells, beta-amyloid fibrils, and advanced glycation end products (AGEs).

membrane

GO Category: 
cellular_component
Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network

Add comment

Log in to post comments