Cre12.g527850.t1.1 Translin family protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre12.g527850.t1.1 chromosome_12 Translin family protein CDS 5201883 5205485 + 3 602

Phytozome

Locus Genomic View Functional Annotation
Cre12.g527850.t1.1 Cre12.g527850.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
TRA1 g13001.t1 JGI158901 30792369 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0017
motif_0017_1

motif_0017_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000000036
Motif Bicluster: 
bicluster_0017
Width: 
24
Number of Sites: 
1
Consensus: 
CaCCGCCgCcnCcaCcgCCGCcnC
motif_0017_2

motif_0017_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
47
Motif Bicluster: 
bicluster_0017
Width: 
23
Number of Sites: 
1
Consensus: 
CtgttgctGcTGcTgctggTgnt
 0.19
bicluster_0179
motif_0179_1

motif_0179_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00083
Motif Bicluster: 
bicluster_0179
Width: 
11
Number of Sites: 
1
Consensus: 
AGCaGCAGCAg
motif_0179_2

motif_0179_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.67
Motif Bicluster: 
bicluster_0179
Width: 
21
Number of Sites: 
1
Consensus: 
CgCCaCCAGCgCCGnCagCag
 0.15

GO Terms

GO:0043565 -

sequence-specific DNA binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI158901

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