Cre09.g397253.t1.1 FAD-binding Berberine family protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre09.g397253.t1.1 chromosome_9 FAD-binding Berberine family protein CDS 4757501 4762082 + 4 581

Phytozome

Locus Genomic View Functional Annotation
Cre09.g397253.t1.1 Cre09.g397253.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g9859.t1, Cre02.g134100.t1.1 Not available 30780725 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0030
motif_0030_1

motif_0030_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00028
Motif Bicluster: 
bicluster_0030
Width: 
21
Number of Sites: 
1
Consensus: 
AatTGtAtTtacAnnnaCatT
motif_0030_2

motif_0030_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
Motif Bicluster: 
bicluster_0030
Width: 
0
Number of Sites: 
1
 0.18
bicluster_0161
motif_0161_1

motif_0161_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0005
Motif Bicluster: 
bicluster_0161
Width: 
24
Number of Sites: 
1
Consensus: 
acCAcCaGaAgCAgCAgcAgCAgc
motif_0161_2

motif_0161_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.031
Motif Bicluster: 
bicluster_0161
Width: 
22
Number of Sites: 
1
Consensus: 
GGCAGCagCAGCAGCaGctgcA
 0.17

GO Terms

GO:0008762 GO:0016491 GO:0050660 GO:0055114 -

UDP-N-acetylmuramate dehydrogenase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: UDP-N-acetylmuramate + NADP+ = UDP-N-acetyl-3-O-(1-carboxyvinyl)-D-glucosamine + NADPH + H+.

oxidoreductase activity

GO Category: 
molecular_function
Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.

flavin adenine dinucleotide binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes, in either the oxidized form, FAD, or the reduced form, FADH2.

oxidation-reduction process

GO Category: 
biological_process
Details: 
A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network

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