Cre01.g012650.t1.1 gated outwardly-rectifying K+ channel

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre01.g012650.t1.1 chromosome_1 gated outwardly-rectifying K+ channel CDS 2304728 2317117 + 12 389

Phytozome

Locus Genomic View Functional Annotation
Cre01.g012650.t1.1 Cre01.g012650.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
KCN9 g313.t1 Not available 30788583 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0150
motif_0150_1

motif_0150_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.29
Motif Bicluster: 
bicluster_0150
Width: 
15
Number of Sites: 
1
Consensus: 
gCATgcanACaTGCA
motif_0150_2

motif_0150_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
44
Motif Bicluster: 
bicluster_0150
Width: 
15
Number of Sites: 
1
Consensus: 
tTttAttgTgTcTgT
 0.11
bicluster_0209
motif_0209_1

motif_0209_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:17
e.value: 
0.0053
Motif Bicluster: 
bicluster_0209
Width: 
15
Number of Sites: 
1
Consensus: 
CGCCaCCAcCtCcAC
motif_0209_2

motif_0209_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:17
e.value: 
0.66
Motif Bicluster: 
bicluster_0209
Width: 
21
Number of Sites: 
1
Consensus: 
AaTAcATTCAtGatTacaTAA
 0.16

GO Terms

GO:0005515 GO:0005216 GO:0006811 GO:0055085 GO:0016020 -

protein binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

ion channel activity

GO Category: 
molecular_function
Details: 
Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism.

ion transport

GO Category: 
biological_process
Details: 
The directed movement of charged atoms or small charged molecules into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.

transmembrane transport

GO Category: 
biological_process
Details: 
The process in which a solute is transported from one side of a membrane to the other.

membrane

GO Category: 
cellular_component
Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network

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