Cre16.g650550.t1.2 Nucleoside diphosphate kinase family protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre16.g650550.t1.2 chromosome_16 Nucleoside diphosphate kinase family protein CDS 1166895 1169403 + 2 508

Phytozome

Locus Genomic View Functional Annotation
Cre16.g650550.t1.2 Cre16.g650550.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g15739.t2, Cre16.g650550.t1.1 JGI58944 30777847 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0076
motif_0076_1

motif_0076_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000000000000037
Motif Bicluster: 
bicluster_0076
Width: 
21
Number of Sites: 
1
Consensus: 
AgCAcCaGCgccaGCaGCaGC
motif_0076_2

motif_0076_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000000000007
Motif Bicluster: 
bicluster_0076
Width: 
23
Number of Sites: 
1
Consensus: 
TTACAtTCATGAttatTtAAgaA
 0.17
bicluster_0159
motif_0159_1

motif_0159_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000017
Motif Bicluster: 
bicluster_0159
Width: 
15
Number of Sites: 
1
Consensus: 
aagtAtaaTAaAAtA
motif_0159_2

motif_0159_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
1
Motif Bicluster: 
bicluster_0159
Width: 
24
Number of Sites: 
1
Consensus: 
GgCAgCgGCAGgagCAGCaGCAgC
 0.24

GO Terms

GO:0004550 GO:0005524 GO:0006165 GO:0006183 GO:0006228 GO:0006241 -

nucleoside diphosphate kinase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: ATP + nucleoside diphosphate = ADP + nucleoside triphosphate.

ATP binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.

nucleoside diphosphate phosphorylation

GO Category: 
biological_process
Details: 
The process of introducing a phosphate group into a nucleoside diphosphate to produce a nucleoside triphosphate.

GTP biosynthetic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways resulting in the formation of GTP, guanosine triphosphate.

UTP biosynthetic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways resulting in the formation of UTP, uridine (5'-)triphosphate.

CTP biosynthetic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways resulting in the formation of CTP, cytidine 5'-triphosphate.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI58944

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