Cre17.g734200.t1.2 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre17.g734200.t1.2 chromosome_17 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein CDS 4855528 4860182 - 4 654

Phytozome

Locus Genomic View Functional Annotation
Cre17.g734200.t1.2 Cre17.g734200.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g17751.t1, Cre17.g734200.t1.1 JGI129557 30782833 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0066
motif_0066_1

motif_0066_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
2300
Motif Bicluster: 
bicluster_0066
Width: 
24
Number of Sites: 
1
Consensus: 
CCCACATCAaaCnaGCgtTGaCcT
motif_0066_2

motif_0066_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
3200
Motif Bicluster: 
bicluster_0066
Width: 
15
Number of Sites: 
1
Consensus: 
gTAggTTtTGtaGcT
 0.15
bicluster_0134
motif_0134_1

motif_0134_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
450000
Motif Bicluster: 
bicluster_0134
Width: 
23
Number of Sites: 
1
Consensus: 
AACTAATGCGTACGcAGACCAGA
motif_0134_2

motif_0134_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
660
Motif Bicluster: 
bicluster_0134
Width: 
24
Number of Sites: 
1
Consensus: 
TaAaTTtccaTattTacaTgCcaa
 0.11

GO Terms

GO:0030170 GO:0009058 -

pyridoxal phosphate binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6.

biosynthetic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI129557

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