Cre17.g734100.t1.2 adenylosuccinate synthase

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre17.g734100.t1.2 chromosome_17 adenylosuccinate synthase CDS 4840633 4844200 + 3 567

Phytozome

Locus Genomic View Functional Annotation
Cre17.g734100.t1.2 Cre17.g734100.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g17746.t1, Cre17.g734100.t1.1 JGI196727 30782432 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0127
motif_0127_1

motif_0127_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
8
Motif Bicluster: 
bicluster_0127
Width: 
24
Number of Sites: 
1
Consensus: 
CcAcCAgcgccGCCATCagcngcc
motif_0127_2

motif_0127_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
18
Motif Bicluster: 
bicluster_0127
Width: 
24
Number of Sites: 
1
Consensus: 
TTACatTcaTGatTAgcTaAGGaA
 0.16
bicluster_0179
motif_0179_1

motif_0179_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00083
Motif Bicluster: 
bicluster_0179
Width: 
11
Number of Sites: 
1
Consensus: 
AGCaGCAGCAg
motif_0179_2

motif_0179_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.67
Motif Bicluster: 
bicluster_0179
Width: 
21
Number of Sites: 
1
Consensus: 
CgCCaCCAGCgCCGnCagCag
 0.15

GO Terms

GO:0004019 GO:0005525 GO:0006164 -

adenylosuccinate synthase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: L-aspartate + GTP + IMP = N(6)-(1,2-dicarboxyethyl)-AMP + GDP + 3 H(+) + phosphate.

GTP binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with GTP, guanosine triphosphate.

purine nucleotide biosynthetic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways resulting in the formation of a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI196727

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