Cre13.g569850.t1.2 ammonium transporter 1;2

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre13.g569850.t1.2 chromosome_13 ammonium transporter 1;2 CDS 1187847 1192671 + 4 824

Phytozome

Locus Genomic View Functional Annotation
Cre13.g569850.t1.2 Cre13.g569850.t1.2

Help

Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
AMT4 g14020.t1, Cre13.g569850.t1.1 JGI156131 30784754 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0119
motif_0119_1

motif_0119_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.048
Motif Bicluster: 
bicluster_0119
Width: 
24
Number of Sites: 
1
Consensus: 
TTTAgTTTGGGCTGGTATtTaCAA
motif_0119_2

motif_0119_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.91
Motif Bicluster: 
bicluster_0119
Width: 
18
Number of Sites: 
1
Consensus: 
TgCcgTTGcAaactGTnt
 0.20
bicluster_0124
motif_0124_1

motif_0124_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
8.5e-32
Motif Bicluster: 
bicluster_0124
Width: 
24
Number of Sites: 
1
Consensus: 
CGCCGCCGcCGCcGCcGCCGCCGC
motif_0124_2

motif_0124_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
1.3e-25
Motif Bicluster: 
bicluster_0124
Width: 
24
Number of Sites: 
1
Consensus: 
acacaCACacaCACanAcaCaCAC
 0.27

GO Terms

GO:0008519 GO:0015696 GO:0016020 -

ammonium transmembrane transporter activity

GO Category: 
molecular_function
Details: 
Catalysis of the transfer of ammonium from one side of a membrane to the other. Ammonium is the cation NH4+ which is formed from N2 by root-nodule bacteria in leguminous plants and is an excretory product in ammonotelic animals.

ammonium transport

GO Category: 
biological_process
Details: 
The directed movement of ammonium into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Ammonium is the cation NH4+ which is formed from N2 by root-nodule bacteria in leguminous plants and is an excretory product in ammonotelic animals.

membrane

GO Category: 
cellular_component
Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI156131

Add comment

Log in to post comments