Cre09.g389250.t1.2 LSD1-like 3

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre09.g389250.t1.2 chromosome_9 LSD1-like 3 CDS 2753401 2757653 + 4 252

Phytozome

Locus Genomic View Functional Annotation
Cre09.g389250.t1.2 Cre09.g389250.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
AOF1 g9513.t1, Cre09.g389250.t1.1 JGI173525 30780285 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0018
motif_0018_1

motif_0018_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000000000003
Motif Bicluster: 
bicluster_0018
Width: 
21
Number of Sites: 
1
Consensus: 
CGCCGCtGcCGCtGCcGCtGC
motif_0018_2

motif_0018_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
Motif Bicluster: 
bicluster_0018
Width: 
0
Number of Sites: 
1
 0.18
bicluster_0019
motif_0019_1

motif_0019_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.029
Motif Bicluster: 
bicluster_0019
Width: 
21
Number of Sites: 
1
Consensus: 
tttgcAAAtgCTtatAtgnnt
motif_0019_2

motif_0019_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
7e-35
Motif Bicluster: 
bicluster_0019
Width: 
21
Number of Sites: 
1
Consensus: 
TGcTggtGCTGnTgCtGCTGc
 0.27

GO Terms

GO:0016491 GO:0055114 -

oxidoreductase activity

GO Category: 
molecular_function
Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.

oxidation-reduction process

GO Category: 
biological_process
Details: 
A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI173525

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