Cre07.g339150.t1.1 TCP-1/cpn60 chaperonin family protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre07.g339150.t1.1 chromosome_7 TCP-1/cpn60 chaperonin family protein CDS 3921995 3929073 - 7 078

Phytozome

Locus Genomic View Functional Annotation
Cre07.g339150.t1.1 Cre07.g339150.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
CPN60B2 g7889.t1 JGI136288 30775388 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0038
motif_0038_1

motif_0038_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00072
Motif Bicluster: 
bicluster_0038
Width: 
21
Number of Sites: 
1
Consensus: 
TTtGgTTTaGTtTGGGCTGGT
motif_0038_2

motif_0038_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00032
Motif Bicluster: 
bicluster_0038
Width: 
18
Number of Sites: 
1
Consensus: 
CgCtGCcGCtGCcGCcGC
 0.17
bicluster_0181
motif_0181_1

motif_0181_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
96000
Motif Bicluster: 
bicluster_0181
Width: 
14
Number of Sites: 
1
Consensus: 
TatncAAtAGtTTG
motif_0181_2

motif_0181_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
7500
Motif Bicluster: 
bicluster_0181
Width: 
15
Number of Sites: 
1
Consensus: 
CAGcAGCAgcGAGcn
 0.13

GO Terms

GO:0005524 GO:0044267 -

ATP binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.

cellular protein metabolic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways involving a specific protein, rather than of proteins in general, occurring at the level of an individual cell. Includes cellular protein modification.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI136288

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