Cre10.g453807.t2.1 Peptidase S41 family protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre10.g453807.t2.1 chromosome_10 Peptidase S41 family protein CDS 4789198 4797360 + 8 162

Phytozome

Locus Genomic View Functional Annotation
Cre10.g453807.t2.1 Cre10.g453807.t2.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g11144.t1 JGI196882 30790442 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0119
motif_0119_1

motif_0119_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.048
Motif Bicluster: 
bicluster_0119
Width: 
24
Number of Sites: 
1
Consensus: 
TTTAgTTTGGGCTGGTATtTaCAA
motif_0119_2

motif_0119_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.91
Motif Bicluster: 
bicluster_0119
Width: 
18
Number of Sites: 
1
Consensus: 
TgCcgTTGcAaactGTnt
 0.20
bicluster_0161
motif_0161_1

motif_0161_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0005
Motif Bicluster: 
bicluster_0161
Width: 
24
Number of Sites: 
1
Consensus: 
acCAcCaGaAgCAgCAgcAgCAgc
motif_0161_2

motif_0161_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.031
Motif Bicluster: 
bicluster_0161
Width: 
22
Number of Sites: 
1
Consensus: 
GGCAGCagCAGCAGCaGctgcA
 0.17

GO Terms

GO:0005515 GO:0008236 GO:0006508 -

protein binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

serine-type peptidase activity

GO Category: 
molecular_function
Details: 
Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).

proteolysis

GO Category: 
biological_process
Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI196882

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