Cre06.g278163.t1.1 HOPW1-1-interacting 1

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre06.g278163.t1.1 chromosome_6 HOPW1-1-interacting 1 CDS 3791392 3795573 + 4 181

Phytozome

Locus Genomic View Functional Annotation
Cre06.g278163.t1.1 Cre06.g278163.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
ARG9 g6306.t1, Cre13.g596500.t1.1, Cre13.g596500.t1.2 Not available 30779286 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0119
motif_0119_1

motif_0119_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.048
Motif Bicluster: 
bicluster_0119
Width: 
24
Number of Sites: 
1
Consensus: 
TTTAgTTTGGGCTGGTATtTaCAA
motif_0119_2

motif_0119_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.91
Motif Bicluster: 
bicluster_0119
Width: 
18
Number of Sites: 
1
Consensus: 
TgCcgTTGcAaactGTnt
 0.20
bicluster_0187
motif_0187_1

motif_0187_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
41
Motif Bicluster: 
bicluster_0187
Width: 
24
Number of Sites: 
1
Consensus: 
AccCTatGGGACttcgCcAAcCTG
motif_0187_2

motif_0187_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
90
Motif Bicluster: 
bicluster_0187
Width: 
23
Number of Sites: 
1
Consensus: 
TtAatcCtgTCccAtnTcACatC
 0.16

GO Terms

GO:0008483 GO:0030170 -

transaminase activity

GO Category: 
molecular_function
Details: 
Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid.

pyridoxal phosphate binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network

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