Cre08.g368450.t2.1 ribophorin II (RPN2) family protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre08.g368450.t2.1 chromosome_8 ribophorin II (RPN2) family protein CDS 2047520 2050143 - 2 623

Phytozome

Locus Genomic View Functional Annotation
Cre08.g368450.t2.1 Cre08.g368450.t2.1

Help

Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g8635.t2 JGI175668 30773421 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0020
motif_0020_1

motif_0020_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00000024
Motif Bicluster: 
bicluster_0020
Width: 
15
Number of Sites: 
1
Consensus: 
TGGtGGtGcTGGcGG
motif_0020_2

motif_0020_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000000001
Motif Bicluster: 
bicluster_0020
Width: 
21
Number of Sites: 
1
Consensus: 
GCcGCCGCTGCCgCcgCTGCC
 0.12
bicluster_0149
motif_0149_1

motif_0149_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.28
Motif Bicluster: 
bicluster_0149
Width: 
20
Number of Sites: 
1
Consensus: 
AcAAtTATgcaAgtatGGaa
motif_0149_2

motif_0149_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000025
Motif Bicluster: 
bicluster_0149
Width: 
24
Number of Sites: 
1
Consensus: 
AgcAgcaGgnggGgCaGGaGCtGg
 0.23

GO Terms

GO:0006487 GO:0008250 GO:0016021 -

protein N-linked glycosylation

GO Category: 
biological_process
Details: 
A protein glycosylation process in which a carbohydrate or carbohydrate derivative unit is added to a protein via the N4 atom of peptidyl-asparagine, the omega-N of arginine, or the N1' atom peptidyl-tryptophan.

oligosaccharyltransferase complex

GO Category: 
cellular_component
Details: 
A protein complex that is found in the endoplasmic reticulum membrane of eukaryotes and transfers lipid-linked oligosaccharide precursor to asparagine residues on nascent proteins. In yeast, the complex includes at least nine different subunits, whereas in mammalian cells at least three different forms of the complex have been detected.

integral to membrane

GO Category: 
cellular_component
Details: 
Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI175668

Add comment

Log in to post comments