Cre03.g172000.t1.2 NAD(P)-binding Rossmann-fold superfamily protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre03.g172000.t1.2 chromosome_3 NAD(P)-binding Rossmann-fold superfamily protein CDS 4004486 4009408 + 4 922

Phytozome

Locus Genomic View Functional Annotation
Cre03.g172000.t1.2 Cre03.g172000.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
OAR1 g3545.t1, Cre03.g172000.t1.1 JGI335991 30786866 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0066
motif_0066_1

motif_0066_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
2300
Motif Bicluster: 
bicluster_0066
Width: 
24
Number of Sites: 
1
Consensus: 
CCCACATCAaaCnaGCgtTGaCcT
motif_0066_2

motif_0066_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
3200
Motif Bicluster: 
bicluster_0066
Width: 
15
Number of Sites: 
1
Consensus: 
gTAggTTtTGtaGcT
 0.15
bicluster_0134
motif_0134_1

motif_0134_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
450000
Motif Bicluster: 
bicluster_0134
Width: 
23
Number of Sites: 
1
Consensus: 
AACTAATGCGTACGcAGACCAGA
motif_0134_2

motif_0134_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
660
Motif Bicluster: 
bicluster_0134
Width: 
24
Number of Sites: 
1
Consensus: 
TaAaTTtccaTattTacaTgCcaa
 0.11

GO Terms

GO:0016491 GO:0008152 -

oxidoreductase activity

GO Category: 
molecular_function
Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.

metabolic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI335991

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