Cre13.g606652.t1.1

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre13.g606652.t1.1 chromosome_13 CDS 4990940 4997585 - 6 645

Phytozome

Locus Genomic View Functional Annotation
Cre13.g606652.t1.1 Cre13.g606652.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g14626.t1 Not available 30783950 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0179
motif_0179_1

motif_0179_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00083
Motif Bicluster: 
bicluster_0179
Width: 
11
Number of Sites: 
1
Consensus: 
AGCaGCAGCAg
motif_0179_2

motif_0179_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.67
Motif Bicluster: 
bicluster_0179
Width: 
21
Number of Sites: 
1
Consensus: 
CgCCaCCAGCgCCGnCagCag
 0.15
bicluster_0199
motif_0199_1

motif_0199_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000031
Motif Bicluster: 
bicluster_0199
Width: 
21
Number of Sites: 
1
Consensus: 
GgCGatGGcGGcGGCgGcaGC
motif_0199_2

motif_0199_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.04
Motif Bicluster: 
bicluster_0199
Width: 
15
Number of Sites: 
1
Consensus: 
cGCagcTGCTgnTGC
 0.19

GO Terms

GO:0003723 GO:0003964 GO:0006278 -

RNA binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.

RNA-directed DNA polymerase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1). Catalyzes RNA-template-directed extension of the 3'- end of a DNA strand by one deoxynucleotide at a time.

RNA-dependent DNA replication

GO Category: 
biological_process
Details: 
A DNA replication process that uses RNA as a template for RNA-dependent DNA polymerases (e.g. reverse transcriptase) that synthesize the new strands.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network

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