Cre13.g572750.t2.1 Copper amine oxidase family protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre13.g572750.t2.1 chromosome_13 Copper amine oxidase family protein CDS 1511923 1520169 - 8 246

Phytozome

Locus Genomic View Functional Annotation
Cre13.g572750.t2.1 Cre13.g572750.t2.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
AMX3 g14085.t2 JGI206147 30784384 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0082
motif_0082_1

motif_0082_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000043
Motif Bicluster: 
bicluster_0082
Width: 
19
Number of Sites: 
1
Consensus: 
CgTgATAAcgTgtAcaTaT
motif_0082_2

motif_0082_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
63
Motif Bicluster: 
bicluster_0082
Width: 
24
Number of Sites: 
1
Consensus: 
CCCACAaGCagAactAGgGGcCAc
 0.23
bicluster_0151
motif_0151_1

motif_0151_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
35
Motif Bicluster: 
bicluster_0151
Width: 
15
Number of Sites: 
1
Consensus: 
atTAacTaactaTTT
motif_0151_2

motif_0151_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
510
Motif Bicluster: 
bicluster_0151
Width: 
11
Number of Sites: 
1
Consensus: 
CatAtAtATAG
 0.10

GO Terms

GO:0005507 GO:0008131 GO:0048038 GO:0009308 GO:0055114 -

copper ion binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with copper (Cu) ions.

primary amine oxidase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: a primary amine + H2O + O2 = an aldehyde + NH3 + hydrogen peroxide.

quinone binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with a quinone, any member of a class of diketones derivable from aromatic compounds by conversion of two CH groups into CO groups with any necessary rearrangement of double bonds.

amine metabolic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways involving any organic compound that is weakly basic in character and contains an amino or a substituted amino group, as carried out by individual cells. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom.

oxidation-reduction process

GO Category: 
biological_process
Details: 
A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI206147

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