Cre01.g002300.t1.2 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre01.g002300.t1.2 chromosome_1 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein CDS 372676 375035 - 2 359

Phytozome

Locus Genomic View Functional Annotation
Cre01.g002300.t1.2 Cre01.g002300.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
CYN4 g56.t1, Cre01.g002300.t1.1 JGI196289 30788660 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0028
motif_0028_1

motif_0028_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00000028
Motif Bicluster: 
bicluster_0028
Width: 
24
Number of Sites: 
1
Consensus: 
ATAccagcCCAAaCtAAAcCgAAc
motif_0028_2

motif_0028_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0000000000000067
Motif Bicluster: 
bicluster_0028
Width: 
24
Number of Sites: 
1
Consensus: 
cCAncagCACCagCAgcAgCagCA
 0.12
bicluster_0076
motif_0076_1

motif_0076_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000000000000037
Motif Bicluster: 
bicluster_0076
Width: 
21
Number of Sites: 
1
Consensus: 
AgCAcCaGCgccaGCaGCaGC
motif_0076_2

motif_0076_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000000000007
Motif Bicluster: 
bicluster_0076
Width: 
23
Number of Sites: 
1
Consensus: 
TTACAtTCATGAttatTtAAgaA
 0.17

GO Terms

GO:0003755 GO:0006457 -

peptidyl-prolyl cis-trans isomerase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0).

protein folding

GO Category: 
biological_process
Details: 
The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI196289

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