Cre02.g073700.t1.2 Uroporphyrinogen decarboxylase

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre02.g073700.t1.2 chromosome_2 Uroporphyrinogen decarboxylase CDS 76140 79727 - 3 587

Phytozome

Locus Genomic View Functional Annotation
Cre02.g073700.t1.2 Cre02.g073700.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
UPD3 g1305.t2, Cre02.g073700.t1.1 JGI195818 30785832 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0012
motif_0012_1

motif_0012_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000000000000063
Motif Bicluster: 
bicluster_0012
Width: 
21
Number of Sites: 
1
Consensus: 
taCAtaCACACACACaCAcaC
motif_0012_2

motif_0012_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0000054
Motif Bicluster: 
bicluster_0012
Width: 
24
Number of Sites: 
1
Consensus: 
gtTAcatTnaTGaTTAtTTaaGgA
 0.22
bicluster_0182
motif_0182_1

motif_0182_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
12
Motif Bicluster: 
bicluster_0182
Width: 
24
Number of Sites: 
1
Consensus: 
cagtataTatattttAtntGTaAa
motif_0182_2

motif_0182_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00012
Motif Bicluster: 
bicluster_0182
Width: 
15
Number of Sites: 
1
Consensus: 
TgCaTGTGTGtaTgT
 0.17

GO Terms

GO:0004853 GO:0006779 -

uroporphyrinogen decarboxylase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: uroporphyrinogen-III = coproporphyrinogen + 4 CO2.

porphyrin-containing compound biosynthetic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways resulting in the formation of any member of a large group of derivatives or analogs of porphyrin. Porphyrin consists of a ring of four pyrrole nuclei linked each to the next at their alpha positions through a methine group.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI195818

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