Cre12.g503550.t1.2 isoprenoid F

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre12.g503550.t1.2 chromosome_12 isoprenoid F CDS 2717087 2719227 + 2 140

Phytozome

Locus Genomic View Functional Annotation
Cre12.g503550.t1.2 Cre12.g503550.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
MEC1, MECPS1 g12498.t1, Cre12.g503550.t1.1 JGI188593 30793082 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0154
motif_0154_1

motif_0154_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
4e-18
Motif Bicluster: 
bicluster_0154
Width: 
24
Number of Sites: 
1
Consensus: 
cgCtGCcGCcgCtgctaCTGCcgC
motif_0154_2

motif_0154_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
Motif Bicluster: 
bicluster_0154
Width: 
0
Number of Sites: 
1
 0.21
bicluster_0174
motif_0174_1

motif_0174_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.76
Motif Bicluster: 
bicluster_0174
Width: 
19
Number of Sites: 
1
Consensus: 
TGtTGGTGTggGTGAtGaa
motif_0174_2

motif_0174_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
52
Motif Bicluster: 
bicluster_0174
Width: 
24
Number of Sites: 
1
Consensus: 
TtTtgcaTgtgTacATaAAGaAaA
 0.17

GO Terms

GO:0008685 GO:0016114 -

2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: 4-CDP-2-C-methyl-D-erythritol 2-phosphate = 2-C-methyl-D-erythritol 2,4-cyclic diphosphate + CMP.

terpenoid biosynthetic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways resulting in the formation of terpenoids, any member of a class of compounds characterized by an isoprenoid chemical structure.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI188593

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