Cre06.g250800.t2.1 KH domain-containing protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre06.g250800.t2.1 chromosome_6 KH domain-containing protein CDS 255909 258844 - 2 935

Phytozome

Locus Genomic View Functional Annotation
Cre06.g250800.t2.1 Cre06.g250800.t2.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
CRB1 g5617.t1 JGI182403 30779209 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0004
motif_0004_1

motif_0004_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
7e-35
Motif Bicluster: 
bicluster_0004
Width: 
24
Number of Sites: 
1
Consensus: 
TgCTGCtgCTgCtgcTGCtGCngC
motif_0004_2

motif_0004_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
Motif Bicluster: 
bicluster_0004
Width: 
0
Number of Sites: 
1
 0.27
bicluster_0009
motif_0009_1

motif_0009_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
1.8
Motif Bicluster: 
bicluster_0009
Width: 
24
Number of Sites: 
1
Consensus: 
tGGaggcgGcGGcggtGgaGgcGG
motif_0009_2

motif_0009_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
1300
Motif Bicluster: 
bicluster_0009
Width: 
8
Number of Sites: 
1
Consensus: 
AAATggAA
 0.33

GO Terms

GO:0003723 GO:0005515 -

RNA binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.

protein binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI182403

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