Cre16.g682100.t1.2 NAD(P)-binding Rossmann-fold superfamily protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre16.g682100.t1.2 chromosome_16 NAD(P)-binding Rossmann-fold superfamily protein CDS 5326328 5330201 - 3 873

Phytozome

Locus Genomic View Functional Annotation
Cre16.g682100.t1.2 Cre16.g682100.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
TDR1 g16461.t1, Cre16.g682100.t1.1 JGI381419 30777642 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0020
motif_0020_1

motif_0020_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00000024
Motif Bicluster: 
bicluster_0020
Width: 
15
Number of Sites: 
1
Consensus: 
TGGtGGtGcTGGcGG
motif_0020_2

motif_0020_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000000001
Motif Bicluster: 
bicluster_0020
Width: 
21
Number of Sites: 
1
Consensus: 
GCcGCCGCTGCCgCcgCTGCC
 0.12
bicluster_0210
motif_0210_1

motif_0210_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:17
e.value: 
20
Motif Bicluster: 
bicluster_0210
Width: 
11
Number of Sites: 
1
Consensus: 
ATGcATGaAgA
motif_0210_2

motif_0210_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:17
e.value: 
0.15
Motif Bicluster: 
bicluster_0210
Width: 
21
Number of Sites: 
1
Consensus: 
GGCaGgAGcgGcAGtgGtaGC
 0.12

GO Terms

GO:0016491 GO:0008152 -

oxidoreductase activity

GO Category: 
molecular_function
Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.

metabolic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI381419

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