Cre12.g497400.t1.2 RNA polymerase III RPC4

Chromosome Product Feature Type Transcript Start End Strand Length
Cre12.g497400.t1.2 chromosome_12 RNA polymerase III RPC4 CDS 3347440 3351591 + 4 151
Locus Genomic View Functional Annotation
Cre12.g497400.t1.2 Cre12.g497400.t1.2

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Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g12637.t1, Cre12.g497400.t1.1 Not available 30792265 Search
Motif 1 Motif 2 Residual
bicluster_0022

motif_0022_1

e.value: 
0.64
Motif Bicluster: 
Width: 
21
Number of Sites: 
1
Consensus: 
CcAcctgCaCCacCagCaCCt

motif_0022_2

Motif Bicluster: 
Width: 
0
Number of Sites: 
1
0.28
bicluster_0188

motif_0188_1

e.value: 
0.00000041
Motif Bicluster: 
Width: 
24
Number of Sites: 
1
Consensus: 
CCgcCaCCGCCagCnCcgcCnCca

motif_0188_2

e.value: 
0.000000000039
Motif Bicluster: 
Width: 
15
Number of Sites: 
1
Consensus: 
CgGCAGCAGCAGCAG
0.25
GO:0003677 GO:0003899 GO:0006383 GO:0005666 -

DNA binding

GO Category: 
molecular_function
Details: 
Any molecular function by which a gene product interacts selectively with DNA (deoxyribonucleic acid).

DNA-directed RNA polymerase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo'.

transcription from RNA polymerase III promoter

GO Category: 
biological_process
Details: 
The synthesis of RNA from a DNA template by RNA polymerase III, originating at an RNAP III promoter.

DNA-directed RNA polymerase III complex

GO Category: 
cellular_component
Details: 
RNA polymerase III, one of three nuclear DNA-directed RNA polymerases found in all eukaryotes, is a multisubunit complex; typically it produces 5S rRNA, tRNAs and some of the small nuclear RNAs. Two large subunits comprise the most conserved portion including the catalytic site and share similarity with other eukaryotic and bacterial multisubunit RNA polymerases. The remainder of the complex is composed of smaller subunits (generally ten or more), some of which are also found in RNA polymerase I and others of which are also found in RNA polymerases I and II. Although the core is competent to mediate ribonucleic acid synthesis, it requires additional factors to select the appropriate template.
Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences
Link to STRING STRING Network
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