Cre03.g170300.t1.2

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre03.g170300.t1.2 chromosome_3 CDS 3794457 3801033 + 6 576

Phytozome

Locus Genomic View Functional Annotation
Cre03.g170300.t1.2 Cre03.g170300.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
SUB5 g3506.t1, Cre03.g170300.t1.1 Not available 30787229 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0015
motif_0015_1

motif_0015_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.02
Motif Bicluster: 
bicluster_0015
Width: 
20
Number of Sites: 
1
Consensus: 
GGCGGcGgCGgTGGCgGCGG
motif_0015_2

motif_0015_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
9.7
Motif Bicluster: 
bicluster_0015
Width: 
21
Number of Sites: 
1
Consensus: 
AaTAgtATcTaaAcatAtATa
 0.05
bicluster_0077
motif_0077_1

motif_0077_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.007
Motif Bicluster: 
bicluster_0077
Width: 
20
Number of Sites: 
1
Consensus: 
AcTggTcGGTACAGTAACTC
motif_0077_2

motif_0077_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.014
Motif Bicluster: 
bicluster_0077
Width: 
24
Number of Sites: 
1
Consensus: 
CGACCCCGgCTAtGTCcGGGAgAT
 0.17

GO Terms

GO:0004252 GO:0006508 -

serine-type endopeptidase activity

GO Category: 
molecular_function
Details: 
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).

proteolysis

GO Category: 
biological_process
Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network

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