Cre10.g441100.t1.2 GPI transamidase component Gpi16 subunit family protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre10.g441100.t1.2 chromosome_10 GPI transamidase component Gpi16 subunit family protein CDS 3019010 3023095 - 4 085

Phytozome

Locus Genomic View Functional Annotation
Cre10.g441100.t1.2 Cre10.g441100.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
GIT1, GPIT1 g10855.t1, Cre10.g441100.t1.1 JGI188365 30790652 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0110
motif_0110_1

motif_0110_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
5.5e-27
Motif Bicluster: 
bicluster_0110
Width: 
15
Number of Sites: 
1
Consensus: 
tGCTGCTGCtGCtGc
motif_0110_2

motif_0110_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000002
Motif Bicluster: 
bicluster_0110
Width: 
24
Number of Sites: 
1
Consensus: 
CCacCGCCgCCGCCgctgcCgcCG
 0.25
bicluster_0113
motif_0113_1

motif_0113_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0000016
Motif Bicluster: 
bicluster_0113
Width: 
15
Number of Sites: 
1
Consensus: 
GnTtaTGTTGtTGtT
motif_0113_2

motif_0113_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0000000000001
Motif Bicluster: 
bicluster_0113
Width: 
15
Number of Sites: 
1
Consensus: 
cTGCTGcTaCTGCTG
 0.26

GO Terms

GO:0016255 GO:0042765 -

attachment of GPI anchor to protein

GO Category: 
biological_process
Details: 
A transamidation reaction that results in the cleavage of the polypeptide chain and the concomitant transfer of the GPI anchor to the newly formed carboxy-terminal amino acid of the anchored protein. The cleaved C-terminal contains the C-terminal GPI signal sequence of the newly synthesized polypeptide chain.

GPI-anchor transamidase complex

GO Category: 
cellular_component
Details: 
An enzyme complex which in humans and yeast consists of at least five proteins; for example, the complex contains GAA1, GPI8, PIG-S, PIG-U, and PIG-T in human, and Gaa1p, Gab1p, Gpi8p, Gpi16p, and Gpi17p in yeast. Catalyzes the posttranslational attachment of the carboxyl-terminus of a precursor protein to a GPI-anchor.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI188365

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