Cre16.g673700.t1.2

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre16.g673700.t1.2 chromosome_16 CDS 6402916 6409823 + 6 907

Phytozome

Locus Genomic View Functional Annotation
Cre16.g673700.t1.2 Cre16.g673700.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g16647.t1, Cre16.g673700.t1.1 Not available 30776822 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0128
motif_0128_1

motif_0128_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
820
Motif Bicluster: 
bicluster_0128
Width: 
11
Number of Sites: 
1
Consensus: 
AAGAagAaAaA
motif_0128_2

motif_0128_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
66000
Motif Bicluster: 
bicluster_0128
Width: 
24
Number of Sites: 
1
Consensus: 
CCGctnCtGcTGcTGcTGCTGCnA
 0.13
bicluster_0194
motif_0194_1

motif_0194_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
4.2
Motif Bicluster: 
bicluster_0194
Width: 
24
Number of Sites: 
1
Consensus: 
CTGCtGgTGgTGCTGtTGCTGCTG
motif_0194_2

motif_0194_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
170
Motif Bicluster: 
bicluster_0194
Width: 
11
Number of Sites: 
1
Consensus: 
gaGCAACAAAA
 0.14

GO Terms

GO:0042254 GO:0005634 -

ribosome biogenesis

GO Category: 
biological_process
Details: 
A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of ribosome subunits; includes transport to the sites of protein synthesis.

nucleus

GO Category: 
cellular_component
Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network

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