Cre12.g539100.t1.1 DEA(D/H)-box RNA helicase family protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre12.g539100.t1.1 chromosome_12 DEA(D/H)-box RNA helicase family protein CDS 6548468 6553976 + 5 508

Phytozome

Locus Genomic View Functional Annotation
Cre12.g539100.t1.1 Cre12.g539100.t1.1

Help

Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
HEL57 g13254.t1 JGI129561 30792646 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0131
motif_0131_1

motif_0131_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
3600
Motif Bicluster: 
bicluster_0131
Width: 
15
Number of Sites: 
1
Consensus: 
taTtTAtATtACaAt
motif_0131_2

motif_0131_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
1100
Motif Bicluster: 
bicluster_0131
Width: 
15
Number of Sites: 
1
Consensus: 
ACATTgcAaTgCtTA
 0.12
bicluster_0140
motif_0140_1

motif_0140_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
25
Motif Bicluster: 
bicluster_0140
Width: 
21
Number of Sites: 
1
Consensus: 
AataaCcaAnttTAtTGTaaT
motif_0140_2

motif_0140_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
15
Motif Bicluster: 
bicluster_0140
Width: 
15
Number of Sites: 
1
Consensus: 
tTGGTgTGctTgTTg
 0.11

GO Terms

GO:0003676 GO:0005524 GO:0008026 GO:0004386 -

nucleic acid binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with any nucleic acid.

ATP binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.

ATP-dependent helicase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: ATP + H2O = ADP + phosphate, to drive the unwinding of a DNA or RNA helix.

helicase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: NTP + H2O = NDP + phosphate, to drive the unwinding of a DNA or RNA helix.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI129561

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