Cre09.g406400.t1.1 heavy metal atpase 5

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre09.g406400.t1.1 chromosome_9 heavy metal atpase 5 CDS 6250674 6262754 - 12 080

Phytozome

Locus Genomic View Functional Annotation
Cre09.g406400.t1.1 Cre09.g406400.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g10074.t1 JGI195962 30780469 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0010
motif_0010_1

motif_0010_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0000000071
Motif Bicluster: 
bicluster_0010
Width: 
24
Number of Sites: 
1
Consensus: 
CCgCCaCCGCCnCCGCCgCcgCCt
motif_0010_2

motif_0010_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00027
Motif Bicluster: 
bicluster_0010
Width: 
23
Number of Sites: 
1
Consensus: 
tCaGctGCTGCTGcaGtTGCTgt
 0.23
bicluster_0160
motif_0160_1

motif_0160_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
690
Motif Bicluster: 
bicluster_0160
Width: 
21
Number of Sites: 
1
Consensus: 
TtTGgaAATcAgCtGCAcccT
motif_0160_2

motif_0160_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
Motif Bicluster: 
bicluster_0160
Width: 
0
Number of Sites: 
1
 0.23

GO Terms

GO:0000166 GO:0046872 GO:0030001 -

nucleotide binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.

metal ion binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with any metal ion.

metal ion transport

GO Category: 
biological_process
Details: 
The directed movement of metal ions, any metal ion with an electric charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI195962

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