Cre10.g445600.t1.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre10.g445600.t1.1 chromosome_10 P-loop containing nucleoside triphosphate hydrolases superfamily protein CDS 3625181 3633896 - 8 715

Phytozome

Locus Genomic View Functional Annotation
Cre10.g445600.t1.1 Cre10.g445600.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g10964.t1 JGI420861 30790575 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0137
motif_0137_1

motif_0137_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000019
Motif Bicluster: 
bicluster_0137
Width: 
21
Number of Sites: 
1
Consensus: 
AGcagcAGcaaCAGcngnggc
motif_0137_2

motif_0137_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
Motif Bicluster: 
bicluster_0137
Width: 
0
Number of Sites: 
1
 0.28
bicluster_0140
motif_0140_1

motif_0140_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
25
Motif Bicluster: 
bicluster_0140
Width: 
21
Number of Sites: 
1
Consensus: 
AataaCcaAnttTAtTGTaaT
motif_0140_2

motif_0140_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
15
Motif Bicluster: 
bicluster_0140
Width: 
15
Number of Sites: 
1
Consensus: 
tTGGTgTGctTgTTg
 0.11

GO Terms

GO:0042254 GO:0005634 -

ribosome biogenesis

GO Category: 
biological_process
Details: 
A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of ribosome subunits; includes transport to the sites of protein synthesis.

nucleus

GO Category: 
cellular_component
Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI420861

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