Cre02.g081176.t1.2

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre02.g081176.t1.2 chromosome_2 CDS 1097186 1100825 + 3 639

Phytozome

Locus Genomic View Functional Annotation
Cre02.g081176.t1.2 Cre02.g081176.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g1485.t2, Cre02.g081176.t1.1 Not available 30785613 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0083
motif_0083_1

motif_0083_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000011
Motif Bicluster: 
bicluster_0083
Width: 
24
Number of Sites: 
1
Consensus: 
CtcCgcCtCCAcCacCgCCtgCAG
motif_0083_2

motif_0083_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
2900
Motif Bicluster: 
bicluster_0083
Width: 
15
Number of Sites: 
1
Consensus: 
tttAAAatTcTaCaa
 0.18
bicluster_0145
motif_0145_1

motif_0145_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00059
Motif Bicluster: 
bicluster_0145
Width: 
24
Number of Sites: 
1
Consensus: 
CAgCAgcgcCaGCAgCcaaAaCac
motif_0145_2

motif_0145_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
180
Motif Bicluster: 
bicluster_0145
Width: 
11
Number of Sites: 
1
Consensus: 
aAGAAGAaaAA
 0.14

GO Terms

GO:0003723 GO:0008173 GO:0006396 -

RNA binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.

RNA methyltransferase activity

GO Category: 
molecular_function
Details: 
Catalysis of the transfer of a methyl group from a donor to a nucleoside residue in an RNA molecule.

RNA processing

GO Category: 
biological_process
Details: 
Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network

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