Cre12.g513701.t1.2 hydrolases, acting on acid anhydrides, in phosphorus-containing anhydrides;ATP-dependent helicases;nucleic acid binding;ATP binding;RNA binding;helicases

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre12.g513701.t1.2 chromosome_12 hydrolases, acting on acid anhydrides, in phosphorus-containing anhydrides;ATP-dependent helicases;... CDS 3581427 3588152 - 6 725

Phytozome

Locus Genomic View Functional Annotation
Cre12.g513701.t1.2 Cre12.g513701.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g12682.t1, Cre12.g513701.t1.1 JGI123188 30791778 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0083
motif_0083_1

motif_0083_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000011
Motif Bicluster: 
bicluster_0083
Width: 
24
Number of Sites: 
1
Consensus: 
CtcCgcCtCCAcCacCgCCtgCAG
motif_0083_2

motif_0083_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
2900
Motif Bicluster: 
bicluster_0083
Width: 
15
Number of Sites: 
1
Consensus: 
tttAAAatTcTaCaa
 0.18
bicluster_0177
motif_0177_1

motif_0177_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.015
Motif Bicluster: 
bicluster_0177
Width: 
15
Number of Sites: 
1
Consensus: 
TCAtgcacaCaTGCa
motif_0177_2

motif_0177_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
6.9
Motif Bicluster: 
bicluster_0177
Width: 
24
Number of Sites: 
1
Consensus: 
CtCCcnCtctcCctcCgCnCacCc
 0.22

GO Terms

GO:0003676 GO:0005524 GO:0008026 GO:0004386 GO:0003723 GO:0016818 GO:0005634 -

nucleic acid binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with any nucleic acid.

ATP binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.

ATP-dependent helicase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: ATP + H2O = ADP + phosphate, to drive the unwinding of a DNA or RNA helix.

helicase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: NTP + H2O = NDP + phosphate, to drive the unwinding of a DNA or RNA helix.

RNA binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.

hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides

GO Category: 
molecular_function
Details: 
Catalysis of the hydrolysis of any acid anhydride which contains phosphorus.

nucleus

GO Category: 
cellular_component
Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI123188

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