Cre10.g421200.t1.1 RNA-binding CRS1 / YhbY (CRM) domain protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre10.g421200.t1.1 chromosome_10 RNA-binding CRS1 / YhbY (CRM) domain protein CDS 521233 522906 + 1 673

Phytozome

Locus Genomic View Functional Annotation
Cre10.g421200.t1.1 Cre10.g421200.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g10424.t1 JGI281468 30790573 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0197
motif_0197_1

motif_0197_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0000015
Motif Bicluster: 
bicluster_0197
Width: 
21
Number of Sites: 
1
Consensus: 
aacatAcAATataagAAanaa
motif_0197_2

motif_0197_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.32
Motif Bicluster: 
bicluster_0197
Width: 
15
Number of Sites: 
1
Consensus: 
GttgTTGntggCATG
 0.23
bicluster_0204
motif_0204_1

motif_0204_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:17
e.value: 
0.000000031
Motif Bicluster: 
bicluster_0204
Width: 
24
Number of Sites: 
1
Consensus: 
CnGCCgCtGctnCtGCctCtGCcg
motif_0204_2

motif_0204_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:17
e.value: 
21
Motif Bicluster: 
bicluster_0204
Width: 
21
Number of Sites: 
1
Consensus: 
AaTAaaaTgTaTTcaaAaAnT
 0.23

GO Terms

GO:0003723 -

RNA binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI281468

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