Cre03.g182800.t1.1 alanine:glyoxylate aminotransferase 2

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre03.g182800.t1.1 chromosome_3 alanine:glyoxylate aminotransferase 2 CDS 5222063 5226506 - 4 443

Phytozome

Locus Genomic View Functional Annotation
Cre03.g182800.t1.1 Cre03.g182800.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
AGT2 g3789.t1 JGI133057 30787253 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0051
motif_0051_1

motif_0051_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0052
Motif Bicluster: 
bicluster_0051
Width: 
21
Number of Sites: 
1
Consensus: 
CAGCanCaccAGCAgCAGCAc
motif_0051_2

motif_0051_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.33
Motif Bicluster: 
bicluster_0051
Width: 
15
Number of Sites: 
1
Consensus: 
tAtaAcaTtTGAtAA
 0.21
bicluster_0075
motif_0075_1

motif_0075_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
4.7e-16
Motif Bicluster: 
bicluster_0075
Width: 
21
Number of Sites: 
1
Consensus: 
AgCAGCaGCagCaGCaaCAGC
motif_0075_2

motif_0075_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0000000000000095
Motif Bicluster: 
bicluster_0075
Width: 
23
Number of Sites: 
1
Consensus: 
GGtGGaGGtGGnGGaGgggGgGG
 0.23

GO Terms

GO:0008483 GO:0030170 -

transaminase activity

GO Category: 
molecular_function
Details: 
Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid.

pyridoxal phosphate binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI133057

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