Cre04.g232902.t1.1

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre04.g232902.t1.1 chromosome_4 CDS 4057840 4060965 - 3 125

Phytozome

Locus Genomic View Functional Annotation
Cre04.g232902.t1.1 Cre04.g232902.t1.1

Help

Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g5067.t1, Cre32.g780950.t1.1 Not available 30791268 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0005
motif_0005_1

motif_0005_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
3.9e-20
Motif Bicluster: 
bicluster_0005
Width: 
21
Number of Sites: 
1
Consensus: 
cCgcCaCCacCgCCacCnCCn
motif_0005_2

motif_0005_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0057
Motif Bicluster: 
bicluster_0005
Width: 
11
Number of Sites: 
1
Consensus: 
ACAaACAcAcA
 0.49
bicluster_0008
motif_0008_1

motif_0008_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0000042
Motif Bicluster: 
bicluster_0008
Width: 
15
Number of Sites: 
1
Consensus: 
CACatGCAaACAngC
motif_0008_2

motif_0008_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0000021
Motif Bicluster: 
bicluster_0008
Width: 
21
Number of Sites: 
1
Consensus: 
gctGccgcTGCTaCtGCCgCn
 0.13

GO Terms

GO:0003723 GO:0003746 GO:0043022 GO:0006452 GO:0045901 GO:0045905 -

RNA binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.

translation elongation factor activity

GO Category: 
molecular_function
Details: 
Functions in chain elongation during polypeptide synthesis at the ribosome.

ribosome binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with any part of a ribosome.

translational frameshifting

GO Category: 
biological_process
Details: 
A mechanism whereby different proteins may result from a single mRNA molecule, due to a change in the parsing of three nucleotides per codon relative to an initiating AUG codon.

positive regulation of translational elongation

GO Category: 
biological_process
Details: 
Any process that activates or increases the frequency, rate or extent of translational elongation.

positive regulation of translational termination

GO Category: 
biological_process
Details: 
Any process that activates or increases the frequency, rate or extent of translational termination.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network

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