Cre13.g586000.t1.2 AMP-dependent synthetase and ligase family protein

Chromosome Product Feature Type Transcript Start End Strand Length
Cre13.g586000.t1.2 chromosome_13 AMP-dependent synthetase and ligase family protein CDS 3262888 3269353 - 6 465
Locus Genomic View Functional Annotation
Cre13.g586000.t1.2 Cre13.g586000.t1.2

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Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g14381.t1, Cre13.g586000.t1.1 JGI412667 30784100 Search
Motif 1 Motif 2 Residual
bicluster_0043

motif_0043_1

e.value: 
0.00000000000005
Motif Bicluster: 
Width: 
24
Number of Sites: 
1
Consensus: 
AcaCAcaCAcacaCaCAcAtaaAc

motif_0043_2

e.value: 
0.0000000026
Motif Bicluster: 
Width: 
20
Number of Sites: 
1
Consensus: 
GGAGgtGggGgAgGanGgGG
0.19
bicluster_0075

motif_0075_1

e.value: 
4.7e-16
Motif Bicluster: 
Width: 
21
Number of Sites: 
1
Consensus: 
AgCAGCaGCagCaGCaaCAGC

motif_0075_2

e.value: 
0.0000000000000095
Motif Bicluster: 
Width: 
23
Number of Sites: 
1
Consensus: 
GGtGGaGGtGGnGGaGgggGgGG
0.23
GO:0003824 GO:0008152 -

catalytic activity

GO Category: 
molecular_function
Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.

metabolic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences
Link to STRING STRING Network
JGI412667
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