Cre03.g183650.t1.1 PLC-like phosphodiesterases superfamily protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre03.g183650.t1.1 chromosome_3 PLC-like phosphodiesterases superfamily protein CDS 5288499 5292890 + 4 391

Phytozome

Locus Genomic View Functional Annotation
Cre03.g183650.t1.1 Cre03.g183650.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
GDP4, GDPD4 g3806.t1 JGI123120 30787659 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0063
motif_0063_1

motif_0063_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
6e-22
Motif Bicluster: 
bicluster_0063
Width: 
24
Number of Sites: 
1
Consensus: 
CtGCcGCcgCtGCtaCTGCtGccg
motif_0063_2

motif_0063_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000000002
Motif Bicluster: 
bicluster_0063
Width: 
21
Number of Sites: 
1
Consensus: 
CGcaGCCGCTGCaGCTGgcGC
 0.22
bicluster_0110
motif_0110_1

motif_0110_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
5.5e-27
Motif Bicluster: 
bicluster_0110
Width: 
15
Number of Sites: 
1
Consensus: 
tGCTGCTGCtGCtGc
motif_0110_2

motif_0110_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000002
Motif Bicluster: 
bicluster_0110
Width: 
24
Number of Sites: 
1
Consensus: 
CCacCGCCgCCGCCgctgcCgcCG
 0.25

GO Terms

GO:0008889 GO:0006071 -

glycerophosphodiester phosphodiesterase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: a glycerophosphodiester + H2O = an alcohol + sn-glycerol 3-phosphate.

glycerol metabolic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways involving glycerol, 1,2,3-propanetriol, a sweet, hygroscopic, viscous liquid, widely distributed in nature as a constituent of many lipids.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI123120

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