Cre06.g257950.t1.2 aspartate aminotransferase 1

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre06.g257950.t1.2 chromosome_6 aspartate aminotransferase 1 CDS 1247373 1253425 + 6 052

Phytozome

Locus Genomic View Functional Annotation
Cre06.g257950.t1.2 Cre06.g257950.t1.2

Help

Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g5798.t1, Cre06.g257950.t1.1 JGI126943 30779940 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0131
motif_0131_1

motif_0131_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
3600
Motif Bicluster: 
bicluster_0131
Width: 
15
Number of Sites: 
1
Consensus: 
taTtTAtATtACaAt
motif_0131_2

motif_0131_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
1100
Motif Bicluster: 
bicluster_0131
Width: 
15
Number of Sites: 
1
Consensus: 
ACATTgcAaTgCtTA
 0.12
bicluster_0180
motif_0180_1

motif_0180_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
110
Motif Bicluster: 
bicluster_0180
Width: 
24
Number of Sites: 
1
Consensus: 
GcTncTGGtgnTGCcgGTgcnGnt
motif_0180_2

motif_0180_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
1900
Motif Bicluster: 
bicluster_0180
Width: 
21
Number of Sites: 
1
Consensus: 
TGcATtgagAcaCgCAcACAC
 0.18

GO Terms

GO:0030170 GO:0009058 -

pyridoxal phosphate binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6.

biosynthetic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI126943

Add comment

Log in to post comments