Cre10.g456400.t1.1 Dicarboxylate/amino acid cation sodium transporter

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre10.g456400.t1.1 chromosome_10 Dicarboxylate/amino acid cation sodium transporter CDS 5127896 5133272 + 5 376

Phytozome

Locus Genomic View Functional Annotation
Cre10.g456400.t1.1 Cre10.g456400.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
DAT1 g11198.t2 JGI143076 30790923 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0043
motif_0043_1

motif_0043_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00000000000005
Motif Bicluster: 
bicluster_0043
Width: 
24
Number of Sites: 
1
Consensus: 
AcaCAcaCAcacaCaCAcAtaaAc
motif_0043_2

motif_0043_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0000000026
Motif Bicluster: 
bicluster_0043
Width: 
20
Number of Sites: 
1
Consensus: 
GGAGgtGggGgAgGanGgGG
 0.19
bicluster_0113
motif_0113_1

motif_0113_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0000016
Motif Bicluster: 
bicluster_0113
Width: 
15
Number of Sites: 
1
Consensus: 
GnTtaTGTTGtTGtT
motif_0113_2

motif_0113_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0000000000001
Motif Bicluster: 
bicluster_0113
Width: 
15
Number of Sites: 
1
Consensus: 
cTGCTGcTaCTGCTG
 0.26

GO Terms

GO:0017153 GO:0006835 GO:0016020 -

sodium:dicarboxylate symporter activity

GO Category: 
molecular_function
Details: 
Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: dicarboxylate(out) + Na+(out) = dicarboxylate(in) + Na+(in).

dicarboxylic acid transport

GO Category: 
biological_process
Details: 
The directed movement of dicarboxylic acids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.

membrane

GO Category: 
cellular_component
Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI143076

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