Cre01.g001400.t1.1 metalloendopeptidases;zinc ion binding

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre01.g001400.t1.1 chromosome_1 metalloendopeptidases;zinc ion binding CDS 218742 224662 + 5 920

Phytozome

Locus Genomic View Functional Annotation
Cre01.g001400.t1.1 Cre01.g001400.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
ZMP1 g31.t1 Not available 30788589 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0056
motif_0056_1

motif_0056_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0099
Motif Bicluster: 
bicluster_0056
Width: 
20
Number of Sites: 
1
Consensus: 
GGtggTGGtGGnGgtGGcGG
motif_0056_2

motif_0056_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
130000
Motif Bicluster: 
bicluster_0056
Width: 
11
Number of Sites: 
1
Consensus: 
TATCaTAcAaA
 0.23
bicluster_0166
motif_0166_1

motif_0166_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000000025
Motif Bicluster: 
bicluster_0166
Width: 
11
Number of Sites: 
1
Consensus: 
TGtGTGCaTGt
motif_0166_2

motif_0166_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.58
Motif Bicluster: 
bicluster_0166
Width: 
23
Number of Sites: 
1
Consensus: 
tttAntTTGgcCTGgTATtTaCA
 0.32

GO Terms

GO:0004222 GO:0006508 GO:0007155 GO:0016020 -

metalloendopeptidase activity

GO Category: 
molecular_function
Details: 
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.

proteolysis

GO Category: 
biological_process
Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.

cell adhesion

GO Category: 
biological_process
Details: 
The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules.

membrane

GO Category: 
cellular_component
Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network

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