Cre01.g053850.t1.2 Transducin/WD40 repeat-like superfamily protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre01.g053850.t1.2 chromosome_1 Transducin/WD40 repeat-like superfamily protein CDS 7486953 7491997 - 5 044

Phytozome

Locus Genomic View Functional Annotation
Cre01.g053850.t1.2 Cre01.g053850.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g1190.t1, Cre01.g053850.t1.1 JGI116381 30788730 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0190
motif_0190_1

motif_0190_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.59
Motif Bicluster: 
bicluster_0190
Width: 
19
Number of Sites: 
1
Consensus: 
aTgatGtTGnTgGtgtngT
motif_0190_2

motif_0190_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
150
Motif Bicluster: 
bicluster_0190
Width: 
11
Number of Sites: 
1
Consensus: 
cACCAcCACCA
 0.22
bicluster_0195
motif_0195_1

motif_0195_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
2.2
Motif Bicluster: 
bicluster_0195
Width: 
15
Number of Sites: 
1
Consensus: 
AgnaAgCaCAAGgaA
motif_0195_2

motif_0195_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
7.6
Motif Bicluster: 
bicluster_0195
Width: 
21
Number of Sites: 
1
Consensus: 
nAcnaaaCcAacataAaCaaa
 0.25

GO Terms

GO:0005515 -

protein binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI116381

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