Cre02.g082750.t1.2 photosystem II subunit X

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre02.g082750.t1.2 chromosome_2 photosystem II subunit X CDS 1265927 1267150 + 1 223

Phytozome

Locus Genomic View Functional Annotation
Cre02.g082750.t1.2 Cre02.g082750.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g1518.t1, Cre02.g082750.t1.1 JGI182015 30785435 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0062
motif_0062_1

motif_0062_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.8
Motif Bicluster: 
bicluster_0062
Width: 
23
Number of Sites: 
1
Consensus: 
gCTgCtGttgctGCTGtcaCTGc
motif_0062_2

motif_0062_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
11000
Motif Bicluster: 
bicluster_0062
Width: 
11
Number of Sites: 
1
Consensus: 
ATGGGTGTTGc
 0.07
bicluster_0081
motif_0081_1

motif_0081_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0012
Motif Bicluster: 
bicluster_0081
Width: 
15
Number of Sites: 
1
Consensus: 
CTGCcGcTgCgACTG
motif_0081_2

motif_0081_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
21
Motif Bicluster: 
bicluster_0081
Width: 
24
Number of Sites: 
1
Consensus: 
cATAGGCAatAAaAggcATtgAag
 0.12

GO Terms

GO:0015979 GO:0009523 GO:0016020 -

photosynthesis

GO Category: 
biological_process
Details: 
The synthesis by organisms of organic chemical compounds, especially carbohydrates, from carbon dioxide (CO2) using energy obtained from light rather than from the oxidation of chemical compounds.

photosystem II

GO Category: 
cellular_component
Details: 
A photosystem that contains a pheophytin-quinone reaction center with associated accessory pigments and electron carriers. In cyanobacteria and chloroplasts, in the presence of light, PSII functions as a water-plastoquinone oxidoreductase, transferring electrons from water to plastoquinone, whereas other photosynthetic bacteria carry out anoxygenic photosynthesis and oxidize other compounds to re-reduce the photoreaction center.

membrane

GO Category: 
cellular_component
Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI182015

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