Cre02.g086750.t1.1 DNA-directed RNA polymerases

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre02.g086750.t1.1 chromosome_2 DNA-directed RNA polymerases CDS 1779603 1783448 + 3 845

Phytozome

Locus Genomic View Functional Annotation
Cre02.g086750.t1.1 Cre02.g086750.t1.1

Help

Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g1610.t2 JGI166368 30786081 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0083
motif_0083_1

motif_0083_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000011
Motif Bicluster: 
bicluster_0083
Width: 
24
Number of Sites: 
1
Consensus: 
CtcCgcCtCCAcCacCgCCtgCAG
motif_0083_2

motif_0083_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
2900
Motif Bicluster: 
bicluster_0083
Width: 
15
Number of Sites: 
1
Consensus: 
tttAAAatTcTaCaa
 0.18
bicluster_0145
motif_0145_1

motif_0145_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00059
Motif Bicluster: 
bicluster_0145
Width: 
24
Number of Sites: 
1
Consensus: 
CAgCAgcgcCaGCAgCcaaAaCac
motif_0145_2

motif_0145_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
180
Motif Bicluster: 
bicluster_0145
Width: 
11
Number of Sites: 
1
Consensus: 
aAGAAGAaaAA
 0.14

GO Terms

GO:0003899 GO:0006351 -

DNA-directed RNA polymerase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo'.

transcription, DNA-dependent

GO Category: 
biological_process
Details: 
The cellular synthesis of RNA on a template of DNA.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI166368

Add comment

Log in to post comments