Cre02.g088850.t1.2 6,7-dimethyl-8-ribityllumazine synthase / DMRL synthase / lumazine synthase / riboflavin synthase

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre02.g088850.t1.2 chromosome_2 6,7-dimethyl-8-ribityllumazine synthase / DMRL synthase / lumazine synthase / riboflavin synthase CDS 2076702 2078409 + 1 707

Phytozome

Locus Genomic View Functional Annotation
Cre02.g088850.t1.2 Cre02.g088850.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
RFS2 g1656.t1, Cre02.g088850.t1.1 JGI186616 30785985 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0080
motif_0080_1

motif_0080_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
140
Motif Bicluster: 
bicluster_0080
Width: 
23
Number of Sites: 
1
Consensus: 
GggGaAAtggATggtgAAGnAGA
motif_0080_2

motif_0080_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
6300
Motif Bicluster: 
bicluster_0080
Width: 
21
Number of Sites: 
1
Consensus: 
CtcAtACcAaAaTaCAaTGTa
 0.16
bicluster_0182
motif_0182_1

motif_0182_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
12
Motif Bicluster: 
bicluster_0182
Width: 
24
Number of Sites: 
1
Consensus: 
cagtataTatattttAtntGTaAa
motif_0182_2

motif_0182_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00012
Motif Bicluster: 
bicluster_0182
Width: 
15
Number of Sites: 
1
Consensus: 
TgCaTGTGTGtaTgT
 0.17

GO Terms

GO:0009231 GO:0009349 -

riboflavin biosynthetic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways resulting in the formation of riboflavin (vitamin B2), the precursor for the coenzymes flavin mononucleotide (FMN) and flavin adenine dinucleotide (FAD).

riboflavin synthase complex

GO Category: 
cellular_component
Details: 
An flavoprotein that catalyzes the reaction the breakdown of dimethyl(ribityl)lumazine to form riboflavin and ribitylamino-amino-dihydroxypyrimidine.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI186616

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